Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0469
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.46 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 477 KKRNLKLCNACDKFDNLYSLMLQVVISSR*LLILNIT 587
           +K    +C   D F+N+Y L +  +I      +LN+T
Sbjct: 223 RKNYNSICELVDAFNNIYGLAMLEIIIVVITYVLNLT 259


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 23  YCFMAEIGGWWYLPVWTRNLTTSNCTSYNYAGLIFITRVI 142
           +C++ EIGGW     +T+ L       Y    L+ ++ V+
Sbjct: 134 WCWIVEIGGWL---AFTKQLLIKFVEVYPLFVLLIVSNVV 170


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 489 LKLCNACDKFDNLYSLMLQVVISSR*LLILNIT*H 593
           + LC +CD    L  L+ Q+  +   +L+L  T H
Sbjct: 210 MPLCKSCDLHHRLSKLIKQLNATYGLILLLMFTSH 244


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -2

Query: 571 SSHLLDITTCNISEYRLSNLSQALHNFKLRFF*INYHMNRKLS 443
           SSH+  + TC + +   S+L + L N  ++      H+ R ++
Sbjct: 541 SSHVSAVLTCKVCDQAFSSLKE-LSNHMVKNSHYKEHIMRSIT 582


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,748
Number of Sequences: 336
Number of extensions: 2733
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)