BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0466 (715 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178 52 3e-07 01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354... 52 6e-07 03_05_0351 - 23382786-23382821,23383373-23383634,23384369-233856... 49 4e-06 10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 43 2e-04 09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470... 42 5e-04 02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 38 0.006 09_01_0179 - 2627682-2628086 36 0.024 07_03_0874 - 22202699-22203070,22204239-22204874 31 0.91 02_05_1183 + 34788219-34788533,34788733-34788930,34789010-347893... 30 2.1 09_02_0526 + 10219803-10221107 28 8.5 >02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178 Length = 306 Score = 52.4 bits (120), Expect = 3e-07 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKVE-XXXXX 527 +N+K+ G++V+Y S D DD +P EFLNSL L G+PPH L+LK+ Sbjct: 137 INMKMIGRFRGEVVTYHSFDRPEDDPYNY-YPPEFLNSLTLNGLPPHVLKLKINCPIMLL 195 Query: 526 XXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENI 410 NGTRLV+++ + + I+ G+ NI Sbjct: 196 RNIDPANGLCNGTRLVVREFGRNAIDVEIVVGQHAAVNI 234 >01_05_0799 + 25334460-25334994,25335060-25335236,25335325-25335447, 25335559-25335624,25335717-25336685,25336791-25336912, 25337156-25337549,25337888-25338009,25338253-25338646, 25338983-25339104,25339348-25339830,25340291-25340960, 25341713-25342224,25342484-25342540 Length = 1581 Score = 51.6 bits (118), Expect = 6e-07 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKVEXXXXXX 524 LN+K+ PG Y S D++ DDT+ ++P +FLN++ G+PPH L++KV Sbjct: 1467 LNMKMIDRFPGKEKIYHSFDSIDDDTQN-SYPLDFLNTITPNGLPPHELKVKVNCPVILL 1525 Query: 523 XXXXXXXXXNG-TRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT 380 TRL+++ V + I+ G+ + P I I T Sbjct: 1526 RNLDPNNGLCNRTRLMVRTFQDNVIDAEIVGGQRANKRGRAPGILSIKT 1574 >03_05_0351 - 23382786-23382821,23383373-23383634,23384369-23385675, 23385776-23386290,23386379-23386741,23386916-23387284, 23387365-23388057,23388152-23388238,23388354-23388612 Length = 1296 Score = 48.8 bits (111), Expect = 4e-06 Identities = 23/53 (43%), Positives = 34/53 (64%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545 +N+K+ + GD+++Y S D DD +P EFLNSL G+PPH L+LK+ Sbjct: 1211 INMKMIERFRGDVMTYHSFDRADDDPHNY-YPPEFLNSLTPNGLPPHVLKLKI 1262 >10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106, 5587181-5587234,5587309-5588214,5588313-5590283, 5590833-5591235,5591845-5591857 Length = 1321 Score = 43.2 bits (97), Expect = 2e-04 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545 +N+K+ G+ + Y S D DD +P EFLNSL G+PPH L+LK+ Sbjct: 1246 INMKMIDRFRGEEMLYHSFDRAEDDPHNY-YPPEFLNSLTPNGLPPHILKLKI 1297 >09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672, 4708997-4709393,4710042-4710608,4710708-4710838, 4711274-4711747 Length = 731 Score = 41.9 bits (94), Expect = 5e-04 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545 LN K+ PG Y S D+V DD + ++ +FLN++ G+PPH L++KV Sbjct: 675 LNTKMIDRFPGKEKIYLSFDSVDDDPQN-SYSLDFLNTITPNGLPPHELKVKV 726 >02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618, 14050145-14050272,14050409-14050502,14050749-14051237, 14052622-14052915,14053602-14053732,14053829-14055440, 14055539-14055651,14055902-14056933,14057023-14057145, 14057250-14057688 Length = 1656 Score = 38.3 bits (85), Expect = 0.006 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -1 Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545 LN + P Y S D+V DD ++P ++LNS+ G+PPH L +K+ Sbjct: 1174 LNANMIDRFPVQAKVYHSFDSVDDDPHN-SYPLDYLNSITPNGLPPHELIVKI 1225 >09_01_0179 - 2627682-2628086 Length = 134 Score = 36.3 bits (80), Expect = 0.024 Identities = 15/36 (41%), Positives = 25/36 (69%) Frame = -1 Query: 658 YKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQL 551 Y S D+V DD++ N+P +FLN++ +PPH L++ Sbjct: 100 YHSFDSVDDDSQN-NYPLDFLNTITPNSLPPHELKV 134 >07_03_0874 - 22202699-22203070,22204239-22204874 Length = 335 Score = 31.1 bits (67), Expect = 0.91 Identities = 23/64 (35%), Positives = 28/64 (43%) Frame = -1 Query: 394 PIIPTDVPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGK 215 P TDVP +P++ A + S G T C LDLS F G + AC G Sbjct: 17 PSAATDVP------SYPLSQAQSPANTSSGGSTSPPCHLDLSAELF--GGVAAACGAGGG 68 Query: 214 PSSL 203 P SL Sbjct: 69 PGSL 72 >02_05_1183 + 34788219-34788533,34788733-34788930,34789010-34789359, 34789463-34789619 Length = 339 Score = 29.9 bits (64), Expect = 2.1 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -1 Query: 253 HGQLYVACSRVGKPSSLFVLAKDGLTKNIVHAAA 152 HG +VAC + L +A DG T+N+++AAA Sbjct: 91 HGVFHVACPLSNRDPELMAVAVDG-TRNVMNAAA 123 >09_02_0526 + 10219803-10221107 Length = 434 Score = 27.9 bits (59), Expect = 8.5 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = +3 Query: 579 GKSSEFKNSVGKFTASVSSQTVSIDLYDTKSPGNNWCIF 695 G SE KN+ A VS+ TV + LY S CIF Sbjct: 169 GTGSEKKNNNNNHVAGVSNFTVLLILYTFGSGAKTACIF 207 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,299,668 Number of Sequences: 37544 Number of extensions: 367274 Number of successful extensions: 825 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 822 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1851002996 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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