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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0466
         (715 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178           52   3e-07
01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354...    52   6e-07
03_05_0351 - 23382786-23382821,23383373-23383634,23384369-233856...    49   4e-06
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558...    43   2e-04
09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470...    42   5e-04
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476...    38   0.006
09_01_0179 - 2627682-2628086                                           36   0.024
07_03_0874 - 22202699-22203070,22204239-22204874                       31   0.91 
02_05_1183 + 34788219-34788533,34788733-34788930,34789010-347893...    30   2.1  
09_02_0526 + 10219803-10221107                                         28   8.5  

>02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178
          Length = 306

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -1

Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKVE-XXXXX 527
           +N+K+     G++V+Y S D   DD     +P EFLNSL L G+PPH L+LK+       
Sbjct: 137 INMKMIGRFRGEVVTYHSFDRPEDDPYNY-YPPEFLNSLTLNGLPPHVLKLKINCPIMLL 195

Query: 526 XXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENI 410
                     NGTRLV+++  +   +  I+ G+    NI
Sbjct: 196 RNIDPANGLCNGTRLVVREFGRNAIDVEIVVGQHAAVNI 234


>01_05_0799 + 25334460-25334994,25335060-25335236,25335325-25335447,
            25335559-25335624,25335717-25336685,25336791-25336912,
            25337156-25337549,25337888-25338009,25338253-25338646,
            25338983-25339104,25339348-25339830,25340291-25340960,
            25341713-25342224,25342484-25342540
          Length = 1581

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = -1

Query: 703  LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKVEXXXXXX 524
            LN+K+    PG    Y S D++ DDT+  ++P +FLN++   G+PPH L++KV       
Sbjct: 1467 LNMKMIDRFPGKEKIYHSFDSIDDDTQN-SYPLDFLNTITPNGLPPHELKVKVNCPVILL 1525

Query: 523  XXXXXXXXXNG-TRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT 380
                        TRL+++     V +  I+ G+   +    P I  I T
Sbjct: 1526 RNLDPNNGLCNRTRLMVRTFQDNVIDAEIVGGQRANKRGRAPGILSIKT 1574


>03_05_0351 - 23382786-23382821,23383373-23383634,23384369-23385675,
            23385776-23386290,23386379-23386741,23386916-23387284,
            23387365-23388057,23388152-23388238,23388354-23388612
          Length = 1296

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = -1

Query: 703  LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545
            +N+K+ +   GD+++Y S D   DD     +P EFLNSL   G+PPH L+LK+
Sbjct: 1211 INMKMIERFRGDVMTYHSFDRADDDPHNY-YPPEFLNSLTPNGLPPHVLKLKI 1262


>10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,
            5587181-5587234,5587309-5588214,5588313-5590283,
            5590833-5591235,5591845-5591857
          Length = 1321

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/53 (41%), Positives = 31/53 (58%)
 Frame = -1

Query: 703  LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545
            +N+K+     G+ + Y S D   DD     +P EFLNSL   G+PPH L+LK+
Sbjct: 1246 INMKMIDRFRGEEMLYHSFDRAEDDPHNY-YPPEFLNSLTPNGLPPHILKLKI 1297


>09_02_0133 +
           4707944-4708308,4708320-4708534,4708626-4708672,
           4708997-4709393,4710042-4710608,4710708-4710838,
           4711274-4711747
          Length = 731

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = -1

Query: 703 LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545
           LN K+    PG    Y S D+V DD +  ++  +FLN++   G+PPH L++KV
Sbjct: 675 LNTKMIDRFPGKEKIYLSFDSVDDDPQN-SYSLDFLNTITPNGLPPHELKVKV 726


>02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618,
            14050145-14050272,14050409-14050502,14050749-14051237,
            14052622-14052915,14053602-14053732,14053829-14055440,
            14055539-14055651,14055902-14056933,14057023-14057145,
            14057250-14057688
          Length = 1656

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = -1

Query: 703  LNLKIHQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQLKV 545
            LN  +    P     Y S D+V DD    ++P ++LNS+   G+PPH L +K+
Sbjct: 1174 LNANMIDRFPVQAKVYHSFDSVDDDPHN-SYPLDYLNSITPNGLPPHELIVKI 1225


>09_01_0179 - 2627682-2628086
          Length = 134

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = -1

Query: 658 YKSIDTVCDDTEAVNFPTEFLNSLDLPGMPPHNLQL 551
           Y S D+V DD++  N+P +FLN++    +PPH L++
Sbjct: 100 YHSFDSVDDDSQN-NYPLDFLNTITPNSLPPHELKV 134


>07_03_0874 - 22202699-22203070,22204239-22204874
          Length = 335

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 23/64 (35%), Positives = 28/64 (43%)
 Frame = -1

Query: 394 PIIPTDVPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGK 215
           P   TDVP       +P++ A +     S G T   C LDLS   F  G +  AC   G 
Sbjct: 17  PSAATDVP------SYPLSQAQSPANTSSGGSTSPPCHLDLSAELF--GGVAAACGAGGG 68

Query: 214 PSSL 203
           P SL
Sbjct: 69  PGSL 72


>02_05_1183 +
           34788219-34788533,34788733-34788930,34789010-34789359,
           34789463-34789619
          Length = 339

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 253 HGQLYVACSRVGKPSSLFVLAKDGLTKNIVHAAA 152
           HG  +VAC    +   L  +A DG T+N+++AAA
Sbjct: 91  HGVFHVACPLSNRDPELMAVAVDG-TRNVMNAAA 123


>09_02_0526 + 10219803-10221107
          Length = 434

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 579 GKSSEFKNSVGKFTASVSSQTVSIDLYDTKSPGNNWCIF 695
           G  SE KN+     A VS+ TV + LY   S     CIF
Sbjct: 169 GTGSEKKNNNNNHVAGVSNFTVLLILYTFGSGAKTACIF 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,668
Number of Sequences: 37544
Number of extensions: 367274
Number of successful extensions: 825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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