Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0466
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 103 1e-22
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 103 1e-22
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 103 1e-22
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 103 1e-22
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 102 3e-22
Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z68493-11|CAA92798.2| 174|Caenorhabditis elegans Hypothetical p... 33 0.20
U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z50044-5|CAA90357.2| 332|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine re... 28 7.6
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 103 bits (247), Expect = 1e-22
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIHQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN +H + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1169 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1228
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1229 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1288
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1289 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1348
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1349 NIVTNIV 1355
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 103 bits (247), Expect = 1e-22
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIHQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN +H + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1275 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1334
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1335 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1394
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1395 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1454
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1455 NIVTNIV 1461
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 103 bits (247), Expect = 1e-22
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIHQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN +H + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1275 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1334
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1335 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1394
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1395 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1454
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1455 NIVTNIV 1461
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 103 bits (247), Expect = 1e-22
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIHQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN +H + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1295 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1354
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1355 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1414
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1415 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1474
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1475 NIVTNIV 1481
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 102 bits (244), Expect = 3e-22
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIHQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN +H + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1174 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1233
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1234 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1293
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V
Sbjct: 1294 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKFSS 1353
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1354 NIVTNIV 1360
>Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical
protein F11C3.1 protein.
Length = 471
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -1
Query: 355 IPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKDGLT 176
+ FP++L FA TI+ SQG++ GL CF HG +Y A SRV + V +D +
Sbjct: 403 LQFPVSLNFASTIHGSQGKSFEKLGLYKLNECFEHGMIYTAISRVRRFEDYKVFTEDTVI 462
Query: 175 KNIVHAAAL 149
+N + + L
Sbjct: 463 ENKIEQSLL 471
>Z68493-11|CAA92798.2| 174|Caenorhabditis elegans Hypothetical
protein C33A12.15 protein.
Length = 174
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +3
Query: 537 GDSTFNCK---LCGGMPGKSSEF----KNSVGKFTASVSSQTVSIDLYDTKSPGNNWCIF 695
GD F+ + LC G P +++E KN +GK T V++ T S+ + K+ + W F
Sbjct: 36 GDGAFHVRGKLLCNGKPYENAEIELYEKNIIGKDTHLVTTNTTSLGFFSMKAAVSEWIGF 95
>U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical
protein D1014.3 protein.
Length = 295
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 582 KSSEFKNSVGKFTASVSSQTVSIDLYDTKSPGNNWCIFRFKMA 710
K+SE +G+FT + + +LY+T+ P C+ ++ A
Sbjct: 105 KTSEIYTDMGRFTMAAKNHVSIAELYETELPDKEQCVKHYQQA 147
>Z50044-5|CAA90357.2| 332|Caenorhabditis elegans Hypothetical
protein F22B5.5 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 588 SEFKNSVGKFTASVSSQTVSIDLYDTKSPGN 680
++FKN VG+ + S + + I L T+S GN
Sbjct: 212 AKFKNGVGRVAYNKSGEVIGIGLVSTESSGN 242
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 246 CPCEKHGVLKSKPQ-TDIVWPW 308
C G LKS P TD+VWPW
Sbjct: 463 CHISLAGHLKSTPNITDVVWPW 484
>AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine
receptor, class x protein6 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 412 ILIPRIP-IIPTDVPIQFKRIPFPITL 335
IL +P I+P D PI F +PF +TL
Sbjct: 222 ILFQILPYIVPADQPIWFSSVPFLVTL 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,510,504
Number of Sequences: 27780
Number of extensions: 354483
Number of successful extensions: 856
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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