BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0462 (485 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_06_0098 + 25560158-25560925 32 0.28 02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 31 0.49 06_01_0350 + 2534422-2535615 31 0.65 03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 30 0.86 12_02_0407 - 18654134-18654172,18654913-18655803 30 1.1 12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 29 1.5 06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 29 2.6 04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969... 29 2.6 04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414 28 3.5 05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462... 28 4.6 02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 28 4.6 01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 28 4.6 01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028 27 6.0 02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899... 27 8.0 01_01_0012 + 71903-72935,73468-73981,74619-76008 27 8.0 >05_06_0098 + 25560158-25560925 Length = 255 Score = 31.9 bits (69), Expect = 0.28 Identities = 16/60 (26%), Positives = 26/60 (43%) Frame = -2 Query: 448 HRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSP 269 HRP P P + P L +P + V I P PT F + + ++++ + T P Sbjct: 31 HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90 >02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177, 9215601-9215911,9215944-9216566,9216779-9216968, 9217096-9217197,9217285-9217425,9217815-9218411, 9219126-9219286,9220709-9220824,9221538-9221654, 9221746-9221808,9221879-9221949 Length = 988 Score = 31.1 bits (67), Expect = 0.49 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Frame = -3 Query: 261 PSPEFSRSA-ESIRTPPQM------RCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAAS 103 P P+ SRS ES R P S + + GFHG L+ KL PDL + Sbjct: 168 PPPKRSRSKQESSRASPMKLIKLYPHMSGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWL 226 Query: 102 SGHFGLPRRTLVFKDEGTI 46 HF LVF G I Sbjct: 227 MEHFNPATNQLVFPGRGAI 245 >06_01_0350 + 2534422-2535615 Length = 397 Score = 30.7 bits (66), Expect = 0.65 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 163 PWNSNAQAEKKTLPGPLGGVFRP 95 PW S+A+ E+K LP PL +F P Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64 >03_04_0090 + 17228253-17228403,17229062-17229129,17229238-17230902, 17231002-17231143,17231648-17232399 Length = 925 Score = 30.3 bits (65), Expect = 0.86 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -2 Query: 451 RHRPHPLPVQTRHAPVLRANP 389 +++ H +PVQ H+PVL+ NP Sbjct: 336 KNQDHSVPVQKNHSPVLKTNP 356 >12_02_0407 - 18654134-18654172,18654913-18655803 Length = 309 Score = 29.9 bits (64), Expect = 1.1 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +2 Query: 20 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRY 184 E G+G ++++ PS+ +T P+ P R + CLS ++PI GRY Sbjct: 115 EEGTGRLTLVNPSTGETLAVPPPPRLPPKRRHRRAPLVVSCLS--FGYHPITGRY 167 >12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331, 7295777-7295843,7296461-7296516,7296638-7296691, 7296836-7296961 Length = 225 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 439 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 350 H L + RH P L+A P S + C+LPL Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136 >06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357, 1990434-1990621,1990711-1990835,1990988-1991039, 1991585-1991874,1992229-1992307,1992527-1992657 Length = 464 Score = 28.7 bits (61), Expect = 2.6 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 433 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 320 +P Q + A + A+P + V C LP P+LF L L Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329 >04_03_0732 + 19095320-19095827,19095848-19096621,19096863-19096906, 19097191-19097250 Length = 461 Score = 28.7 bits (61), Expect = 2.6 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -2 Query: 445 RPHPLPVQTRHAPVLRANPYSEVTDP 368 RP+PL V +RHA VL + V DP Sbjct: 133 RPNPLDVVSRHAGVLSRGDHCLVVDP 158 >04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414 Length = 520 Score = 28.3 bits (60), Expect = 3.5 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 347 YIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 222 + +L+ RG P +PAA RRD ++P + Q P G Sbjct: 28 HAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEG 69 >05_04_0162 + 18645459-18645827,18645934-18646149,18646224-18646278, 18646545-18646672,18647134-18647217,18648742-18648867, 18648949-18649086 Length = 371 Score = 27.9 bits (59), Expect = 4.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -3 Query: 459 TRPGTGRIRFPSKPDTPRSSEPILIPKLR 373 TRP TG+ P K D RS + I KLR Sbjct: 108 TRPRTGKAALPLKRDRTRSKRFLEIQKLR 136 >02_05_0300 + 27681204-27681656,27681745-27681840,27681933-27682022, 27682126-27682227,27682310-27682456,27683608-27683748, 27683749-27683808,27685133-27685230,27685308-27685410, 27685954-27686037 Length = 457 Score = 27.9 bits (59), Expect = 4.6 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Frame = +2 Query: 173 EGRYGSEREEHRICGGVRILSADLENSGEGCT-WRC-RAGSYPYPQQVSKVKSL*SIE*C 346 +GR+G++R HR+ G +A SG+ C WR R +P P S++ + Sbjct: 6 DGRFGNKRVHHRL--GPANGAASSSTSGKVCIHWRAGRCNRFPCPYLHSELPEATAKRPS 63 Query: 347 R*GKSANWIRNFGIRIGSEDRGVSGLDG 430 + G N RN G RG G G Sbjct: 64 QSGGGGNVWRN-PHSGGGGGRGAGGAGG 90 >01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 Length = 625 Score = 27.9 bits (59), Expect = 4.6 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = -3 Query: 300 GYGYEPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLPSI 169 G+ P+ H P P+ S R PP R S RSE P + Sbjct: 26 GFDVTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFPPL 70 >01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028 Length = 444 Score = 27.5 bits (58), Expect = 6.0 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -3 Query: 465 LFTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 346 L+TRP +R P+ ++ I P++++QF P+L Sbjct: 228 LYTRPKVQSVRLDPAPEIRKAYLHIARPRVKLQFRIRPFL 267 >02_04_0628 + 24589313-24589472,24589604-24589765,24589850-24589983, 24590108-24590275,24590481-24590562,24590734-24591512 Length = 494 Score = 27.1 bits (57), Expect = 8.0 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = -2 Query: 424 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIW 293 + RH P++ + EV+ + L L Y ++ L + +LL +W Sbjct: 100 ELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLW 143 >01_01_0012 + 71903-72935,73468-73981,74619-76008 Length = 978 Score = 27.1 bits (57), Expect = 8.0 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 261 PSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 169 PSP RS R+P + R S RS Y P + Sbjct: 518 PSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,116,014 Number of Sequences: 37544 Number of extensions: 354398 Number of successful extensions: 1267 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1267 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 999806640 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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