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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0462
         (485 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0098 + 25560158-25560925                                         32   0.28 
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921...    31   0.49 
06_01_0350 + 2534422-2535615                                           31   0.65 
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    30   0.86 
12_02_0407 - 18654134-18654172,18654913-18655803                       30   1.1  
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    29   1.5  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    29   2.6  
04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969...    29   2.6  
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414     28   3.5  
05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462...    28   4.6  
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820...    28   4.6  
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853     28   4.6  
01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028     27   6.0  
02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899...    27   8.0  
01_01_0012 + 71903-72935,73468-73981,74619-76008                       27   8.0  

>05_06_0098 + 25560158-25560925
          Length = 255

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 448 HRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSP 269
           HRP P P  +   P L  +P + V   I   P PT F + +      ++++   +  T P
Sbjct: 31  HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90


>02_02_0346 -
           9214365-9214583,9214830-9214919,9215012-9215177,
           9215601-9215911,9215944-9216566,9216779-9216968,
           9217096-9217197,9217285-9217425,9217815-9218411,
           9219126-9219286,9220709-9220824,9221538-9221654,
           9221746-9221808,9221879-9221949
          Length = 988

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
 Frame = -3

Query: 261 PSPEFSRSA-ESIRTPPQM------RCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAAS 103
           P P+ SRS  ES R  P          S   +  +   GFHG   L+   KL PDL +  
Sbjct: 168 PPPKRSRSKQESSRASPMKLIKLYPHMSGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWL 226

Query: 102 SGHFGLPRRTLVFKDEGTI 46
             HF      LVF   G I
Sbjct: 227 MEHFNPATNQLVFPGRGAI 245


>06_01_0350 + 2534422-2535615
          Length = 397

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 163 PWNSNAQAEKKTLPGPLGGVFRP 95
           PW S+A+ E+K LP PL  +F P
Sbjct: 42  PWRSSARLERKLLPPPLPWLFLP 64


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 451 RHRPHPLPVQTRHAPVLRANP 389
           +++ H +PVQ  H+PVL+ NP
Sbjct: 336 KNQDHSVPVQKNHSPVLKTNP 356


>12_02_0407 - 18654134-18654172,18654913-18655803
          Length = 309

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 20  EPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRY 184
           E G+G ++++ PS+ +T      P+ P     R     + CLS    ++PI GRY
Sbjct: 115 EEGTGRLTLVNPSTGETLAVPPPPRLPPKRRHRRAPLVVSCLS--FGYHPITGRY 167


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 439 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 350
           H L +  RH P L+A P S +    C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 433 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 320
           +P Q + A  + A+P + V    C LP P+LF  L  L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329


>04_03_0732 +
           19095320-19095827,19095848-19096621,19096863-19096906,
           19097191-19097250
          Length = 461

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 445 RPHPLPVQTRHAPVLRANPYSEVTDP 368
           RP+PL V +RHA VL    +  V DP
Sbjct: 133 RPNPLDVVSRHAGVLSRGDHCLVVDP 158


>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
          Length = 520

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 347 YIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 222
           + +L+ RG  P +PAA     RRD   ++P  + Q P    G
Sbjct: 28  HAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEG 69


>05_04_0162 +
           18645459-18645827,18645934-18646149,18646224-18646278,
           18646545-18646672,18647134-18647217,18648742-18648867,
           18648949-18649086
          Length = 371

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 459 TRPGTGRIRFPSKPDTPRSSEPILIPKLR 373
           TRP TG+   P K D  RS   + I KLR
Sbjct: 108 TRPRTGKAALPLKRDRTRSKRFLEIQKLR 136


>02_05_0300 +
           27681204-27681656,27681745-27681840,27681933-27682022,
           27682126-27682227,27682310-27682456,27683608-27683748,
           27683749-27683808,27685133-27685230,27685308-27685410,
           27685954-27686037
          Length = 457

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +2

Query: 173 EGRYGSEREEHRICGGVRILSADLENSGEGCT-WRC-RAGSYPYPQQVSKVKSL*SIE*C 346
           +GR+G++R  HR+  G    +A    SG+ C  WR  R   +P P   S++    +    
Sbjct: 6   DGRFGNKRVHHRL--GPANGAASSSTSGKVCIHWRAGRCNRFPCPYLHSELPEATAKRPS 63

Query: 347 R*GKSANWIRNFGIRIGSEDRGVSGLDG 430
           + G   N  RN     G   RG  G  G
Sbjct: 64  QSGGGGNVWRN-PHSGGGGGRGAGGAGG 90


>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
          Length = 625

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -3

Query: 300 GYGYEPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLPSI 169
           G+   P+ H    P P+      S  R PP  R S RSE   P +
Sbjct: 26  GFDVTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFPPL 70


>01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028
          Length = 444

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 465 LFTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 346
           L+TRP    +R    P+  ++   I  P++++QF   P+L
Sbjct: 228 LYTRPKVQSVRLDPAPEIRKAYLHIARPRVKLQFRIRPFL 267


>02_04_0628 +
           24589313-24589472,24589604-24589765,24589850-24589983,
           24590108-24590275,24590481-24590562,24590734-24591512
          Length = 494

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 424 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIW 293
           + RH P++  +   EV+  +  L L    Y ++ L + +LL +W
Sbjct: 100 ELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLW 143


>01_01_0012 + 71903-72935,73468-73981,74619-76008
          Length = 978

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 261 PSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 169
           PSP   RS    R+P + R S RS  Y P +
Sbjct: 518 PSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,014
Number of Sequences: 37544
Number of extensions: 354398
Number of successful extensions: 1267
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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