Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0459
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 34 0.10
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 32 0.32
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 31 0.97
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 31 0.97
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4) 30 1.3
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 30 1.7
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 30 1.7
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 30 1.7
SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 3.9
SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 28 5.2
SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06) 28 6.9
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 27 9.1
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 35.5 bits (78), Expect = 0.034
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 272 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 451
+++ +LP K + LP S + PT P+ T PS + T TATLPS K
Sbjct: 240 QTTTTLPSTKQPTTTQQTTTTLP--STKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTK 297
Query: 452 EGA----LPSTCPSRQTRP 496
+ +T P+ T+P
Sbjct: 298 QPTTTQQTTATLPTPSTKP 316
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +2
Query: 272 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 451
+++ +LP K + +P S + PT + T LPS + T T TLPS K
Sbjct: 208 QTTTTLPSTKQPTTTQQTTTTIP--STKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTK 265
Query: 452 EGALP----STCPSRQTRPRQGICARTLPR*KE 538
+ P +T PS + TLP K+
Sbjct: 266 QPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQ 298
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 272 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 451
+++ +LP K P P S + PT + T LPS + T TATLP+
Sbjct: 256 QTTTTLPSTKQPTTPQLTTTTFP--STKQPTTTQQTTATLPSTKQPTTTQQTTATLPTPS 313
Query: 452 EGALPSTCPSRQTRP 496
+ +RQ P
Sbjct: 314 TKPTTVSPTTRQPPP 328
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 347 SARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 454
S R PT + T LPS + T T T+PS K+
Sbjct: 199 STRQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQ 234
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 33.9 bits (74), Expect = 0.10
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = -1
Query: 611 FTGVRYFFLYWVRSGHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLLFDWVGL 432
+ G+ + + WV GH DW L + V W + L G VDW + HL+ DWVGL
Sbjct: 784 WVGLGHSVVDWVGLGHSVVDWVG--LGHSVVDW-VGL-GHSVVDW--VGLGHLVVDWVGL 837
Query: 431 RY--VNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFL--FYRVGDVLFDGVGNRNFLND 264
+ V+W L + V D G+G V + G+G+ + + +G + D VG N + D
Sbjct: 838 GHSVVDWV--GLGHSVVDYV--GLGHSVVDYVGLGNSVVDWVGLGHSVVDWVGLGNSVLD 893
Query: 263 SYG 255
G
Sbjct: 894 WVG 896
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 32.3 bits (70), Expect = 0.32
Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +2
Query: 284 SLPRRKAHPLPG--RKENPLPRESARSPTLPRCQTC--PLPS*RDCQGTSSRTATLPS-- 445
+LPR + LP + + LPR R TLPR TC LP +R TLP
Sbjct: 266 TLPRTRLDTLPRVVTRLDTLPRVVTRLDTLPRVVTCLDTLPR------VGTRLDTLPRIV 319
Query: 446 RKEGALPSTCPSRQTRPRQGICARTLPR 529
+ LP T PR G TLPR
Sbjct: 320 TRLDTLPRVVTRLDTLPRVGTRLDTLPR 347
Score = 29.1 bits (62), Expect = 3.0
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +2
Query: 317 GRKENPLPRESARSPTLPRCQTCP--LPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 490
G + + LPR R TLPR T P LP C T R T + LP T
Sbjct: 171 GTRLDTLPRVVTRLDTLPRVVTRPDTLPRVVTCLDTLPRVGT----RLDTLPRVVTRLDT 226
Query: 491 RPRQGICARTLPR 529
PR TLPR
Sbjct: 227 LPRVVTRLDTLPR 239
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 0.97
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +2
Query: 275 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 454
S S P + HP P NP P S P P PS S ++ PS +
Sbjct: 468 SPISNPSPRPHPSPHPSSNPSPNPSPN----PSSDPSPNPSSNPSSDPSPNPSSNPSSEP 523
Query: 455 GALPSTCPSRQTRP 496
P + PS T P
Sbjct: 524 SPNPISNPSISTSP 537
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +2
Query: 308 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 487
P P NP S + P T P+ + S ++ PS + PS+ PS
Sbjct: 511 PSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSD 570
Query: 488 TRP 496
P
Sbjct: 571 PSP 573
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 30.7 bits (66), Expect = 0.97
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -3
Query: 396 LGKGHV*QRGRVGERALSRGRGFSFLPGRGCAFRRGR 286
L KG V +GR+G R RGRG + PGRG RGR
Sbjct: 83 LNKGSV--QGRLGARG--RGRGMARGPGRGMVGARGR 115
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V V
Sbjct: 197 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYSWVSVATYSLVSV 256
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 257 ATYNWVSVATYSWVSV 272
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 5 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 64
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 65 ATYNWVSVATYNWVSV 80
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 21 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 80
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 81 ATYNWVSVATYNWVSV 96
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 37 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 96
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 97 ATYNWVSVATYNWVSV 112
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 53 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 112
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 113 ATYNWVSVATYNWVSV 128
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 69 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 128
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 129 ATYNWVSVATYNWVSV 144
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 85 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 144
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 145 ATYNWVSVATYNWVSV 160
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 101 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 160
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 161 ATYNWVSVATYNWVSV 176
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 117 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 176
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 177 ATYNWVSVATYNWVSV 192
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 133 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 192
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 193 ATYNWVSVATYNWVSV 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 149 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 208
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 209 ATYNWVSVATYNWVSV 224
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 288
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 165 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 224
Query: 287 GNRNFLN-DSYGFVDL 243
N+++ +Y +V +
Sbjct: 225 ATYNWVSVATYNWVSV 240
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGL 360
WV + WV + +W +NWV DN V +
Sbjct: 285 WVSVATYSWVSVATYSWVSVATYNWVSVATDNWVSV 320
>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 380 FDNGVGLGNVHFHGVGDFLFYRVGDVLFDGVGN 282
FD+G+G+G H H YRV DV +DG G+
Sbjct: 793 FDDGIGVGIAHNH-------YRVSDVDYDGAGS 818
>SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4)
Length = 369
Score = 30.3 bits (65), Expect = 1.3
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = -3
Query: 528 RGKVLAHIP*RG----RVCRLGHVLGKAPSFR--LGRVAVRELVP*QSL*LGKGH--V*Q 373
RGKV +P RG RV G V + P+ GRV +E V + GK + V
Sbjct: 101 RGKVYGRVPARGKVYGRVPTYGKVYERVPARGKVYGRVPTQEKVYERVPARGKVNWRVPV 160
Query: 372 RGRVGERALSRGRGFSFLPGRGCAFRR 292
RG+V R +RG+ + +P RG + R
Sbjct: 161 RGKVYWRVPARGKVYGRVPARGKVYGR 187
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 465 GKAPSFRL-GRVAVRELVP*QSL*LGK-GHV*QRGRVGERALSRGRGFSFLPGRGCAFRR 292
G+ FR+ G V E V + GK GHV RG+V R +RG+ + +P G + R
Sbjct: 68 GRVTPFRVYGHVPTHERVSRRVHTHGKYGHVPARGKVYGRVPARGKVYGRVPTYGKVYER 127
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 308 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 454
P P R NP P +A P+ PR + P P +G S +A PS E
Sbjct: 846 PTPLRPTNPTPAHAASKPSNPR-PSNPTPKHAMGEGVSDNSAEPPSPGE 893
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 242 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 421
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 1392 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 1450
Query: 422 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 517
++ + L + + AL ++ ++ P+ + ++
Sbjct: 1451 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 1485
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 242 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 421
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 263 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 321
Query: 422 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 517
++ + L + + AL ++ ++ P+ + ++
Sbjct: 322 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 356
>SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 278 SCSLPR--RKAHPLPGRKENPLPRESARSPTLPRCQT 382
+C LPR R + P PGR NP R + +P C T
Sbjct: 4 TCYLPREIRSSSPSPGRSANPHCRYNESNPRTQGCAT 40
>SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 287 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 466
+PR +P P +NP PR + ++P +PR P PS S + PS +G+ P
Sbjct: 52 IPRVTKNPFPRVTKNPFPRVT-KNP-IPRVTKEPHPSCDQRSHPSCDQGSHPSCDQGSHP 109
Query: 467 S 469
S
Sbjct: 110 S 110
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +2
Query: 290 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 469
P + HP PG P+ + +P +PR T PLP ++ SRT+T PS + PS
Sbjct: 141 PSFQDHPGPGVMPQMPPQMAPGTPLMPRIPTPPLP--QNMGLGLSRTST-PSPELRVSPS 197
Query: 470 TCPSRQTRPRQ 502
P+ +T Q
Sbjct: 198 --PTLKTESTQ 206
>SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -1
Query: 467 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRV 312
W R + W + WY + W R M D G+ ++G +YRV
Sbjct: 77 WYRVTIDQWYRVTIDQWYRVTIDQWYRVMIDQWYGVTIDQWYGATIDQWYRV 128
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 308 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 466
PLP + PLP + + P P PLP + G+ + S K+ LP
Sbjct: 450 PLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 371 RCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ-TRPRQG 505
RC T + + + TS TA R+ + PST PSRQ + PR G
Sbjct: 9 RCDTGRETAPTESRATSLSTAGFCGRRSRSPPSTRPSRQGSAPRTG 54
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 305 HPLPGRKE-NPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 472
HP P +++ +P P + R P + Q P PS + Q S+ P + P T
Sbjct: 202 HPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRHNQQQTPET 258
>SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +2
Query: 311 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 490
LP R N SP T PLP + TS+ +P+ +G + +T PS+Q+
Sbjct: 298 LPPRSSNEASETVIDSPL-----TDPLPDEEGGKVTSNEEEVVPAVSQGVVEATSPSQQS 352
Query: 491 RPRQGIC 511
G C
Sbjct: 353 LHDFGEC 359
>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 350
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 424 TYRNPTQSKRRCLTQYMSQSTDPSPSRYMCQNLTPLKRKFMFQSKCTC 567
T R +QS+R C + S S P+P+R L P+ + + + K TC
Sbjct: 307 TIRRQSQSRRNCYSVISSNSPSPAPNR----RLLPINEEALIE-KETC 349
>SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06)
Length = 673
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 358 PNPTPLSNMSLTQLKRLSRYQF 423
PNP P +NM+ +LK RY++
Sbjct: 524 PNPCPSTNMTCVELKGTPRYRY 545
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 401 RDCQGTSSRTATLPSRKEGALPSTCPSRQT-RP 496
R CQ T S P + A+P CP+ QT RP
Sbjct: 169 RSCQNTISSIPLKPGLEGYAMPRKCPTDQTGRP 201
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 314 PGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTR 493
P K P+E+ ++ + QT P S + + TS +T+ SRK S S +T
Sbjct: 42 PEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLKTS 101
Query: 494 PR 499
P+
Sbjct: 102 PK 103
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -3
Query: 606 GGKVLFSL-LGKERARALRLEHELS------FQRGKVLAHIP*RGRVCRLGHVLGKAPS 451
G + +F + LG E RA+R++HELS +GK + +CR G V PS
Sbjct: 1373 GQRFMFRVGLGSEVERAVRIDHELSQSNRAEIMKGKFTTCLAKGTALCREGLVTSIVPS 1431
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,756
Number of Sequences: 59808
Number of extensions: 262923
Number of successful extensions: 997
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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