Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0459
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ...    31   0.93 
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    29   4.9  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    29   4.9  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    29   4.9  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    29   4.9  
BT023955-1|ABB36459.1|  808|Drosophila melanogaster AT31092p pro...    28   8.6  
AY071594-1|AAL49216.1|  698|Drosophila melanogaster RE64386p pro...    28   8.6  
AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p pro...    28   8.6  
AY061161-1|AAL28709.1|  430|Drosophila melanogaster LD12812p pro...    28   8.6  
AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-P...    28   8.6  
AE014296-2629|AAF49543.2|  698|Drosophila melanogaster CG5235-PA...    28   8.6  

>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
            protein.
          Length = 1314

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = +2

Query: 284  SLPRRKAHPLPGRKENPLPRESARSPT-LPRCQTC--PLPS*RDCQGTSSRTATLPSRKE 454
            +LP  ++    G K  P PR S ++PT LP       P PS R  Q T  R      R  
Sbjct: 865  TLPLSRSRLSAGVKPTPAPRTSLQTPTPLPETTVAKDPTPSKRKSQPTVRREYPSLDRLV 924

Query: 455  GALPSTCPSRQTR 493
             +   T P + +R
Sbjct: 925  ASTTGTIPKKNSR 937


>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 293 RRKAHPLPGRKENPLPRESARSPTLPRCQ 379
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 293 RRKAHPLPGRKENPLPRESARSPTLPRCQ 379
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 293 RRKAHPLPGRKENPLPRESARSPTLPRCQ 379
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 293 RRKAHPLPGRKENPLPRESARSPTLPRCQ 379
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>BT023955-1|ABB36459.1|  808|Drosophila melanogaster AT31092p
           protein.
          Length = 808

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 510
           P P+  S  S+ Q  +  + Q   +  P+Q +++   QY  Q+  PSPS+ +
Sbjct: 510 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 561


>AY071594-1|AAL49216.1|  698|Drosophila melanogaster RE64386p
           protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -1

Query: 563 VHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLLFDWVGLRYVNWYLD 408
           V   + + +  N  R     +D +GSV     WVR+ + D +GL ++ W+++
Sbjct: 13  VQLSFGLAYFENNQRTQDYDVDKNGSVH-HKNWVRNEMMDSLGLYWLKWWIN 63


>AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p
           protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 290 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 469
           PRR+   +P +  + LPR    + T PR +  P    R  Q    +   L  R++  LP+
Sbjct: 10  PRRQLQQMPRQLGHLLPRRQLPAMTAPRKKRRPR---RQLQQRPRQLRQLLPRRQ--LPA 64

Query: 470 -TCPSRQTRPRQ 502
            T P ++ RPR+
Sbjct: 65  MTAPRKKRRPRR 76


>AY061161-1|AAL28709.1|  430|Drosophila melanogaster LD12812p
           protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 510
           P P+  S  S+ Q  +  + Q   +  P+Q +++   QY  Q+  PSPS+ +
Sbjct: 126 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 177


>AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-PA
           protein.
          Length = 1059

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 PNPTPLSNMSLTQLKRLSRYQFTYRN-PTQSKRRCLTQYMSQSTDPSPSRYM 510
           P P+  S  S+ Q  +  + Q   +  P+Q +++   QY  Q+  PSPS+ +
Sbjct: 755 PPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQL 806


>AE014296-2629|AAF49543.2|  698|Drosophila melanogaster CG5235-PA
           protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -1

Query: 563 VHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLLFDWVGLRYVNWYLD 408
           V   + + +  N  R     +D +GSV     WVR+ + D +GL ++ W+++
Sbjct: 13  VQLSFGLAYFENNQRTQDYDVDKNGSVH-HKNWVRNEMMDSLGLYWLKWWIN 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,369,116
Number of Sequences: 53049
Number of extensions: 394409
Number of successful extensions: 1350
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)