Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0458
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 426  LVSFFTTWIFMRMKLPGYLQN*FVS*FCTVLFLG 527
            +V +FT W + R  L  YL        CT +  G
Sbjct: 1400 IVCYFTNWAWYRKGLGKYLPEDIDPDLCTHIVYG 1433



 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 426  LVSFFTTWIFMRMKLPGYLQN*FVS*FCTVLFLG 527
            +V +FT W + R  +  YL +      CT +  G
Sbjct: 1825 VVCYFTNWAWYRQGVGKYLPSDIDPDLCTHIVYG 1858


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 374 HTKTESNSPYLCGVP 418
           H   + NSPY+ GVP
Sbjct: 136 HGHHQKNSPYMDGVP 150


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 413 VPMYFSVILYHLDIHAYEVARIFTELICKLILYCFIFGL 529
           V + + +ILY L+   Y V ++      K I    IFG+
Sbjct: 266 VSVVYVLILYILESLLYMVTKLVVVTFLKFIKKIQIFGI 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,977
Number of Sequences: 336
Number of extensions: 3290
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)