Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0457
(536 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 24 0.74
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 2.3
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 2.3
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 22 3.0
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 3.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 3.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 3.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.9
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 9.1
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 24.2 bits (50), Expect = 0.74
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +2
Query: 353 PGRKKNTLPRESARSPTLPRCQTCSLPT*RDCQGTSSRTATLPSRKKRGLPSTCSSRQ 526
PG K N PRE R+ R P + +R A P+ + G P S Q
Sbjct: 306 PGEKTNIAPRERPRATDHQRRNEPKRPRPNIDRHEVTRPAA-PANRGNGFPKRSSDEQ 362
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 411 VVKHVPYPLKEIVKGPVHVPQPYP 482
+V+ VP P++E+ + P P P
Sbjct: 389 IVEPVPQPVEEVTQKPSSTKAPAP 412
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 22.6 bits (46), Expect = 2.3
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = -1
Query: 491 FFDWVGLRYVNWSLDNLFKWVRNMFDNGVGLGNVHFHG-----VGYFFFYRVGNV 342
FF W + + +S + ++ +F+N G + G VG F VG V
Sbjct: 211 FFGWPIIMIILYSSLMVLNYIDEVFNNNFGYDKKQYIGVVVANVGVAFMINVGTV 265
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 22.2 bits (45), Expect = 3.0
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 369 IPYPVKVHV-PQPYPVVKHVPYPLKEIVKGPVHVP--QPYPVEKKG 497
+ YP V V PYP PYP + + P PY ++ G
Sbjct: 1 LQYPRSVGVYGAPYPSTDQNPYPSIGVESSAFYSPLSNPYALKDAG 46
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 3.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 530 GSVDWNMYWVSPFFFD 483
GSV WN + V+P +D
Sbjct: 281 GSVGWNDWIVAPLGYD 296
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSS 178
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 87 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 134
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 284 SPQNRNCR*ESSCSLPRRKAHSLPGRKKNTLPRESARSPTLPRCQTCS 427
+P N N S + P + S PG+ + ++ SP T S
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.1
Identities = 9/42 (21%), Positives = 19/42 (45%)
Frame = +3
Query: 393 VPQPYPVVKHVPYPLKEIVKGPVHVPQPYPVEKKGAYPVHVP 518
+P+P P+V + ++ ++ V P+ + Y VP
Sbjct: 236 LPKPTPLVPQQGFNMERLLAPSTEVSAPFFRQPLDLYNFRVP 277
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,139
Number of Sequences: 336
Number of extensions: 1962
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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