Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0454
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   0.64 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   4.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   4.5  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    21   4.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 356 PWAGVLVHHVRALPTPSPLFQ-ALDPVG 276
           P   V  H+V   P  +PLFQ  L P+G
Sbjct: 409 PIPNVSPHYVTPTPPEAPLFQNVLPPIG 436


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 386 LHLDQPRQPDPWAGV 342
           L    P+ P PW G+
Sbjct: 40  LRFKAPQAPQPWTGI 54


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 386 LHLDQPRQPDPWAGV 342
           L    P+ P PW G+
Sbjct: 42  LRFKAPQAPQPWTGI 56


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 386 LHLDQPRQPDPWAGV 342
           L    P+ P PW G+
Sbjct: 40  LRFKAPQAPQPWTGI 54


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 386 LHLDQPRQPDPWAGV 342
           L    P+ P PW G+
Sbjct: 42  LRFKAPQAPQPWTGI 56


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 386 LHLDQPRQPDPWAGV 342
           L    P+ P PW G+
Sbjct: 14  LRFKAPQAPQPWTGI 28


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +2

Query: 326 VRDVLEH-LPRDLAVWVDPGEVSYRIGEKGAVKVLFSSDQ 442
           V+ V+ + LP+ +  +V     + R+G KG     F  DQ
Sbjct: 478 VQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQ 517


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,761
Number of Sequences: 336
Number of extensions: 2977
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)