Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0454
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010303-1|AAQ23621.1|  536|Drosophila melanogaster LD04013p pro...   216   1e-56
AE014298-2329|AAS65384.1|  564|Drosophila melanogaster CG9214-PB...   216   1e-56
AE014298-2328|AAF48563.1|  564|Drosophila melanogaster CG9214-PA...   216   1e-56
AF177464-1|AAD55946.1|  562|Drosophila melanogaster Tob homolog ...   207   5e-54
BT023552-1|AAY84952.1|  317|Drosophila melanogaster IP09780p pro...    30   1.5  
AE014297-600|AAF54028.2|  269|Drosophila melanogaster CG31496-PA...    30   1.5  
AE014134-2783|AAF53570.1|  509|Drosophila melanogaster CG13271-P...    29   4.5  
DQ257377-1|ABB73022.1|  589|Drosophila melanogaster dihydropyrim...    28   5.9  
AY089281-1|AAL90019.1|  336|Drosophila melanogaster AT07829p pro...    28   5.9  
AF160900-1|AAD46840.1|  589|Drosophila melanogaster BcDNA.HL0269...    28   5.9  
AF077837-1|AAD52007.1|  589|Drosophila melanogaster collapsin re...    28   5.9  
AE014297-282|AAF52002.1|  589|Drosophila melanogaster CG1411-PA,...    28   5.9  
AE013599-3562|AAF46973.1|  336|Drosophila melanogaster CG12782-P...    28   5.9  

>BT010303-1|AAQ23621.1|  536|Drosophila melanogaster LD04013p
           protein.
          Length = 536

 Score =  216 bits (528), Expect = 1e-56
 Identities = 96/134 (71%), Positives = 118/134 (88%), Gaps = 2/134 (1%)
 Frame = +2

Query: 92  MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
           MHIE+QVALNFVISYLYNKLPRRRVNIFGEELEKAL+DKF+ HWYP++P +GSA+RCLKT
Sbjct: 1   MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALRDKFQDHWYPEKPFKGSAYRCLKT 60

Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSDQRAA 451
           G P+D VLERAARESGVP+ D+LE+LP +L+VW+DPGEVS+RIGEKGAVK+L++ +    
Sbjct: 61  GDPIDSVLERAARESGVPIGDILENLPNELSVWIDPGEVSFRIGEKGAVKILYTENNENH 120

Query: 452 DE--RTDREVTRAF 487
           ++    DREVT+ F
Sbjct: 121 EDSHSADREVTKMF 134


>AE014298-2329|AAS65384.1|  564|Drosophila melanogaster CG9214-PB,
           isoform B protein.
          Length = 564

 Score =  216 bits (528), Expect = 1e-56
 Identities = 96/134 (71%), Positives = 118/134 (88%), Gaps = 2/134 (1%)
 Frame = +2

Query: 92  MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
           MHIE+QVALNFVISYLYNKLPRRRVNIFGEELEKAL+DKF+ HWYP++P +GSA+RCLKT
Sbjct: 1   MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALRDKFQDHWYPEKPFKGSAYRCLKT 60

Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSDQRAA 451
           G P+D VLERAARESGVP+ D+LE+LP +L+VW+DPGEVS+RIGEKGAVK+L++ +    
Sbjct: 61  GDPIDSVLERAARESGVPIGDILENLPNELSVWIDPGEVSFRIGEKGAVKILYTENNENH 120

Query: 452 DE--RTDREVTRAF 487
           ++    DREVT+ F
Sbjct: 121 EDSHSADREVTKMF 134


>AE014298-2328|AAF48563.1|  564|Drosophila melanogaster CG9214-PA,
           isoform A protein.
          Length = 564

 Score =  216 bits (528), Expect = 1e-56
 Identities = 96/134 (71%), Positives = 118/134 (88%), Gaps = 2/134 (1%)
 Frame = +2

Query: 92  MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
           MHIE+QVALNFVISYLYNKLPRRRVNIFGEELEKAL+DKF+ HWYP++P +GSA+RCLKT
Sbjct: 1   MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALRDKFQDHWYPEKPFKGSAYRCLKT 60

Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSDQRAA 451
           G P+D VLERAARESGVP+ D+LE+LP +L+VW+DPGEVS+RIGEKGAVK+L++ +    
Sbjct: 61  GDPIDSVLERAARESGVPIGDILENLPNELSVWIDPGEVSFRIGEKGAVKILYTENNENH 120

Query: 452 DE--RTDREVTRAF 487
           ++    DREVT+ F
Sbjct: 121 EDSHSADREVTKMF 134


>AF177464-1|AAD55946.1|  562|Drosophila melanogaster Tob homolog
           protein.
          Length = 562

 Score =  207 bits (506), Expect = 5e-54
 Identities = 92/130 (70%), Positives = 114/130 (87%), Gaps = 2/130 (1%)
 Frame = +2

Query: 104 VQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKTGGPL 283
           +QVALNFVISYLYNKLPRRRVNIFGEELEKAL+DKF+ HWYP++P +GSA+RCLKTG P+
Sbjct: 1   IQVALNFVISYLYNKLPRRRVNIFGEELEKALRDKFQDHWYPEKPFKGSAYRCLKTGDPI 60

Query: 284 DPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSDQRAADE-- 457
           D VLERAARESGVP+ D+LE+LP +L+VW+DPGEVS+RIGEKGAVK+L++ +    ++  
Sbjct: 61  DSVLERAARESGVPIGDILENLPNELSVWIDPGEVSFRIGEKGAVKILYTENNENHEDSH 120

Query: 458 RTDREVTRAF 487
             DREVT+ F
Sbjct: 121 SADREVTKMF 130


>BT023552-1|AAY84952.1|  317|Drosophila melanogaster IP09780p
           protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/64 (26%), Positives = 25/64 (39%)
 Frame = -3

Query: 380 LDQPRQPDPWAGVLVHHVRALPTPSPLFQALDPVGLQFSGIGTQSPGTVCPGTNDP*ICP 201
           L Q  QP P     +  V  +P PSP+F A+ P     + +       V P      + P
Sbjct: 163 LQQANQPAPAIAPSIAQVPVMPQPSPVFPAVSPAAAP-ANVAPAPAAPVAPAAPAAPVVP 221

Query: 200 *VPS 189
             P+
Sbjct: 222 VAPA 225


>AE014297-600|AAF54028.2|  269|Drosophila melanogaster CG31496-PA
           protein.
          Length = 269

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/64 (26%), Positives = 25/64 (39%)
 Frame = -3

Query: 380 LDQPRQPDPWAGVLVHHVRALPTPSPLFQALDPVGLQFSGIGTQSPGTVCPGTNDP*ICP 201
           L Q  QP P     +  V  +P PSP+F A+ P     + +       V P      + P
Sbjct: 115 LQQANQPAPAIAPSIAQVPVMPQPSPVFPAVSPAAAP-ANVAPAPAAPVAPAAPAAPVVP 173

Query: 200 *VPS 189
             P+
Sbjct: 174 VAPA 177


>AE014134-2783|AAF53570.1|  509|Drosophila melanogaster CG13271-PA
           protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = +2

Query: 275 GPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGE 385
           GP+ P + ++    G+ V++  + LP++LA ++D  +
Sbjct: 235 GPIRPTVPQSIEIGGIQVKEQADPLPKELAKFLDKAD 271


>DQ257377-1|ABB73022.1|  589|Drosophila melanogaster
           dihydropyrimidinase mutant supA4 protein.
          Length = 589

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 117 RATCTSICIFGSTSEQSYGENRWCLPLGDR 28
           RA  +  C+FG T   S G +   +P GDR
Sbjct: 273 RARRSGYCVFGETLASSLGRSMSAVPKGDR 302


>AY089281-1|AAL90019.1|  336|Drosophila melanogaster AT07829p
           protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWV 373
           GGP++    ++  ES   VR V  H  RDL  W+
Sbjct: 177 GGPVEQGRMKSPGESNTQVRSVALHQNRDLTSWL 210


>AF160900-1|AAD46840.1|  589|Drosophila melanogaster BcDNA.HL02693
           protein.
          Length = 589

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 117 RATCTSICIFGSTSEQSYGENRWCLPLGDR 28
           RA  +  C+FG T   S G +   +P GDR
Sbjct: 273 RARRSGYCVFGETLASSLGRSMSAVPKGDR 302


>AF077837-1|AAD52007.1|  589|Drosophila melanogaster collapsin
           response mediator proteinprotein.
          Length = 589

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 117 RATCTSICIFGSTSEQSYGENRWCLPLGDR 28
           RA  +  C+FG T   S G +   +P GDR
Sbjct: 273 RARRSGYCVFGETLASSLGRSMSAVPKGDR 302


>AE014297-282|AAF52002.1|  589|Drosophila melanogaster CG1411-PA,
           isoform A protein.
          Length = 589

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 117 RATCTSICIFGSTSEQSYGENRWCLPLGDR 28
           RA  +  C+FG T   S G +   +P GDR
Sbjct: 273 RARRSGYCVFGETLASSLGRSMSAVPKGDR 302


>AE013599-3562|AAF46973.1|  336|Drosophila melanogaster CG12782-PA
           protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWV 373
           GGP++    ++  ES   VR V  H  RDL  W+
Sbjct: 177 GGPVEQGRMKSPGESNTQVRSVALHQNRDLTSWL 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,077,852
Number of Sequences: 53049
Number of extensions: 596922
Number of successful extensions: 1462
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)