Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0454
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical pr... 75 2e-14
AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein... 75 2e-14
U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical pr... 32 0.25
U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 4.1
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 4.1
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 4.1
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 27 7.2
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 27 7.2
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical
protein C03C11.2 protein.
Length = 263
Score = 75.4 bits (177), Expect = 2e-14
Identities = 42/116 (36%), Positives = 58/116 (50%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
M+ EV+ +NFV YL+ +PRR V IFG EL L F W P G R + T
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60
Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSD 439
L +A E+GVP DVL LP ++ ++ +PG V R+ E G ++ D
Sbjct: 61 TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENGIETPIWIGD 114
>AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein
protein.
Length = 263
Score = 75.4 bits (177), Expect = 2e-14
Identities = 42/116 (36%), Positives = 58/116 (50%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
M+ EV+ +NFV YL+ +PRR V IFG EL L F W P G R + T
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60
Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSD 439
L +A E+GVP DVL LP ++ ++ +PG V R+ E G ++ D
Sbjct: 61 TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENGIETPIWIGD 114
>U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical
protein T09B4.6 protein.
Length = 192
Score = 31.9 bits (69), Expect = 0.25
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 271
M +EVQ A+ F+ ++++ ++PR RV F L L + + C +
Sbjct: 1 MILEVQEAVQFLSTFMFGRIPRSRVKSFCGHLSSLLSEAIDA-----KRCVDRYDLIVFA 55
Query: 272 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEV 388
G D + +AAR + V + ++ E + L + + G V
Sbjct: 56 DGRSDDTIVQAARRAYVHLGELQECMNNGLIMEIMNGRV 94
>U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical
protein R13A1.9 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 71 CSLVLPKMHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDR 235
C+ ++ +MHI + A +F + + K+ +N FGE+ D F G+W D+
Sbjct: 188 CNSIVWRMHIPLIPATSFFLYLGWMKVAEALLNPFGED-----DDDFEGNWVIDK 237
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 456 SSAARWSLLNKTFTAPFSPIRYDTSPGSTQTARSLGRCSSTSRTGTP 316
SSA+R S + TAP + ++ +P ST+T+R SSTSR P
Sbjct: 272 SSASRGSNMAGNPTAPLTTTQHTFAPNSTETSR-----SSTSRGKAP 313
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = -2
Query: 453 SAARWSLLNKTFT------APFSPIRYDTSPGSTQTARSLGRCSSTSRTGTPD 313
S WSL N T+ AP+ P +T P ++ A + ++ +R PD
Sbjct: 136 SRIEWSLANSTYPESKVQEAPYCPCELETCPTTSINALTRSTMNTANRKSVPD 188
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EKALKDKFRGHWYPDRPCRGSAFRCLKTG 274
EK L K+RG+ + DRP G KTG
Sbjct: 1556 EKCLDAKYRGYRFADRPAPGDMELEWKTG 1584
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A protein.
Length = 1951
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EKALKDKFRGHWYPDRPCRGSAFRCLKTG 274
EK L K+RG+ + DRP G KTG
Sbjct: 1562 EKCLDAKYRGYRFADRPAPGDMELEWKTG 1590
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 462 VLSSAARWSLLNKTFTAPFSPIRYDTSPGSTQTARSLGRCSSTSRTGTP 316
V +S + N T AP + + TSP + T S + SST+ P
Sbjct: 231 VTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVP 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,443,212
Number of Sequences: 27780
Number of extensions: 288323
Number of successful extensions: 700
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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