Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0453
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    48   2e-04
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    42   0.020
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    40   0.046
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q1E7F2 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = -3

Query: 675 LMFRWVDELTAHLVLSGYWSP 613
           L+ RWVDELTAHLVLSGYWSP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 41.5 bits (93), Expect = 0.020
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 280  GRQRLGSAPGIAEVHGRR 333
            GRQRLGSAPGIAEVHGRR
Sbjct: 969  GRQRLGSAPGIAEVHGRR 986


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 40.3 bits (90), Expect = 0.046
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +2

Query: 323 MGDGNHSPSGGSYARLPTRA 382
           MGDGNHSPSG  YA LPTRA
Sbjct: 1   MGDGNHSPSGRPYASLPTRA 20


>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 85

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 416 SDVSSLNDF-FLLPL*ADEHTTHLMVSGYRRPWTSAMPGAEPS-RCL 282
           S V+ L+ F F +       T +L+   +R  WTS +PGA+P  RCL
Sbjct: 17  STVAQLDTFIFQIKFSCFRQTIYLVDDNHRHSWTSTIPGAQPDHRCL 63


>UniRef50_Q1E7F2 Cluster: Putative uncharacterized protein; n=2;
            Eukaryota|Rep: Putative uncharacterized protein -
            Coccidioides immitis
          Length = 1910

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = -3

Query: 354  PPDGEWL--PSPMDFSNA--RGRTKPLPTSMNK*IHIDSTIFKYRRITNTMVV--REDNG 193
            PP G+ L  PS +   N+  RGR K  P+ +      D  I + +R+TNT  V  R+D G
Sbjct: 926  PPRGKGLNVPSTLTIENSWPRGRDKKAPSPLTSGPLFDKHIERLKRVTNTEFVEYRKDKG 985

Query: 192  I 190
            I
Sbjct: 986  I 986


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,914,228
Number of Sequences: 1657284
Number of extensions: 16715107
Number of successful extensions: 35581
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35576
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)