Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0452
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306...    30   1.3  
10_08_0210 - 15874289-15875663,15878248-15879263                       28   5.2  
10_08_0332 - 16843295-16843356,16843884-16846656                       28   6.9  
02_05_0953 - 33027007-33029079                                         28   6.9  
09_04_0755 - 19948942-19949088,19949249-19949396,19949512-199496...    27   9.2  

>09_02_0022 +
           3065644-3065953,3066048-3067162,3067261-3067437,
           3067535-3067648,3068614-3068718,3068930-3069064,
           3069148-3069203,3069277-3069382,3069515-3069631,
           3069705-3069831,3069915-3070141,3070164-3070727
          Length = 1050

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 50  LFCTLCKDAFSFPTILWRPTMRLLNVS 130
           +FC LCK   S+P ++ +P + +L +S
Sbjct: 693 IFCILCKSPESYPQVMPKPVLTILELS 719


>10_08_0210 - 15874289-15875663,15878248-15879263
          Length = 796

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 122 LIIALLGATKWWEMRRRPYKEYKKVLVKIK 33
           +I++LLGA + WEM    + ++ KVL+  K
Sbjct: 396 VILSLLGAKEIWEMTTYVFSDWTKVLLLCK 425


>10_08_0332 - 16843295-16843356,16843884-16846656
          Length = 944

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 323 LCAKECILSYLLSVTSKHYLHKIKILFGIHK 231
           LC K C   Y + +   H+   I   FG+H+
Sbjct: 574 LCLKNCTALYRVRLEENHFTGDISEAFGVHR 604


>02_05_0953 - 33027007-33029079
          Length = 690

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 465 HFLICHNSVLYVQVSLYEGFFGRNASNGSYLELFY 569
           H ++ HN   Y+  SLY   FG+N + GS+L L Y
Sbjct: 273 HVVLGHNRGTYIGTSLY---FGQNTA-GSFLPLVY 303


>09_04_0755 -
           19948942-19949088,19949249-19949396,19949512-19949648,
           19949933-19949995,19950175-19950288,19951410-19951514,
           19951794-19951853,19952604-19952639,19953176-19953467,
           19954168-19954253,19954641-19954901
          Length = 482

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 323 DKIQHAYVNEFNNLSHLISTSG 388
           DKI HA  N   N SHL S+SG
Sbjct: 356 DKIFHAIKNSMPNASHLKSSSG 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,615,192
Number of Sequences: 37544
Number of extensions: 272937
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)