Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0452
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.8  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 62  LCKDAFSFPTILWRPTMR 115
           +C  A SFP I+W   +R
Sbjct: 172 ICSSAISFPAIVWWRAVR 189


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 162 LYVSIIIIMSRTRETPCNYLYV 227
           + V + + + R    PCNYL V
Sbjct: 60  ILVCVAVFLVRKLRRPCNYLLV 81


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 94  FVAPNNAIIKRL*N 135
           F+APNN  +K L N
Sbjct: 131 FIAPNNGAVKVLAN 144


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 94  FVAPNNAIIKRL*N 135
           F+APNN  +K L N
Sbjct: 169 FIAPNNGAVKVLAN 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,628
Number of Sequences: 438
Number of extensions: 3911
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)