Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0450
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 32 0.068
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.64
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 29 0.64
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 1.9
SPBC30D10.08 |mgm101||mitochondrial nucleoid protein|Schizosacch... 27 1.9
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 27 3.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 3.4
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 26 4.5
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 26 4.5
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 26 5.9
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 5.9
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 5.9
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 7.9
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 32.3 bits (70), Expect = 0.068
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 436 IKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 594
I VE QPEDSK T+V +S +EK + + S D A + +++ +D
Sbjct: 525 IFVENALKQPEDSKQTKVSLMSENLSSKEKTAVPPRQKSRDIIASVTDVISSLD 578
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.64
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 391 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 561
AK S D K + K + A+ PE SK V+ KEE S +++E S+ +
Sbjct: 41 AKQSSKTDVSPKKSK-KEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSES 96
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 29.1 bits (62), Expect = 0.64
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +1
Query: 439 KVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESD 618
+VEE A+ S E S KPSA AE D I V I L +
Sbjct: 289 RVEEKLAKRTQSFRREDNANRERSTSRKPSADKAE-KTDKTDAIAEKVSDIRLGDGEKKS 347
Query: 619 AAAVPEI---KTPEAADAP 666
+ E+ KTP DAP
Sbjct: 348 SETDSEVAATKTPATEDAP 366
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 394 KSSEIPDAEAKSADI-KVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 570
K S+ P+ + + KVEEP+ + ++ + + TV + +E+ P A S
Sbjct: 446 KPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVTF 505
Query: 571 PNMVKK 588
VKK
Sbjct: 506 SEDVKK 511
>SPBC30D10.08 |mgm101||mitochondrial nucleoid
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 267
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 446 KNQLLSLKIQKLKYKLPSLKFQKKKNL 526
KN LLS KI + Y+ S+++QK KN+
Sbjct: 40 KNGLLSPKITQRFYQNSSIQYQKDKNI 66
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 499 AEISKEEKPSATDAEGSADSAAIIPNMVKKI--DLAPNVESDAAAVPEIKTPEA 654
A K+ +PS + +A + PN VK + D+ P + +I PEA
Sbjct: 556 ASALKDREPSEKELPSTAKETSFAPNAVKTLDEDITPQSSNWQTVAKQIIFPEA 609
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 3.4
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = -2
Query: 662 ASAASGVLISGTAAASLSTLGAKSIFFTMLGMMXXXXXXXXXXXALGFSSFEISATVACT 483
+S AS IS +A S + SI + + SS S++ +
Sbjct: 202 SSVASSSEISAGSATSYVPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVS 261
Query: 482 SVFESSG*AAGSSTLISADFASAS 411
SV S+ A SST+ SA +SAS
Sbjct: 262 SVVSSATSVAASSTISSATSSSAS 285
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 330 VFWGYIVLFGLWYSGYLVVTNW 265
VFW +IVL GL+Y Y V ++
Sbjct: 356 VFWIWIVLPGLYYQNYWQVAHF 377
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 412 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 558
D + I E PA + K + + + S E+PS T EG+ D+
Sbjct: 601 DEYQRQLHIDFENPAVSASE-KLSTEEIIPQESNFEEPSTTKKEGNVDT 648
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +1
Query: 448 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAA 627
EP +P+ S T +I+ + + + + GS A++ +++K+ID+ ++ES A+
Sbjct: 483 EPFKRPQSSSAPTILT--DINGDFEMALGASGGSRIVTAVLDSIIKRIDMDYDIESMVAS 540
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +1
Query: 466 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 645
E+S + +E+SK KP+ TD + + K +P + AA P ++
Sbjct: 33 EESLPSILGEKSEVSKPFKPAVTDPSNAKKEINMAIESPSKKATSPKKATPAAVAP-VEA 91
Query: 646 PEAAD 660
A D
Sbjct: 92 TSAVD 96
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 418 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSAD 555
++K + KVEE ++ D K + ++ KEEK TD++ +AD
Sbjct: 476 DSKETEDKVEETESKEADVKAKETDSIEVDDKEEK---TDSKETAD 518
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 415 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 552
AEA + D + P K V +VAE ++E + ++E A
Sbjct: 76 AEASTGDASTQSPETSENVVKNSVDESVAEKPEKEDLAVIESEDKA 121
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 400 SEIPDAEAKSAD-IKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 576
+E+P K +K ++P ++P + +T+V+ A ++E +P +D + +
Sbjct: 227 AELPTEPPKQTRFLKSQQPTSEP-NVETQVEEQPALENEESEPEPSDDQF---------D 276
Query: 577 MVKKIDLAPNVE 612
+V+++D+ PNV+
Sbjct: 277 LVEEVDVLPNVD 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.130 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,207
Number of Sequences: 5004
Number of extensions: 35095
Number of successful extensions: 131
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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