Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0449
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.3  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 163 YLYISQYIHICKQS*LMLVKLSNVSNNRYHET 68
           Y+   + ++IC  + L+  K+SN++ +  H T
Sbjct: 171 YVQAIEVLYICSYTVLIRNKISNLNTSLIHST 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 251 KVFNMPLNNDYLGTHETESCVSVISGI 171
           K++ MP  +++L    TE+C ++ S I
Sbjct: 147 KLWKMPSLSEFLSLFGTETCPAIGSAI 173


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 251 KVFNMPLNNDYLGTHETESCVSVISGI 171
           K++ MP  +++L    TE+C ++ S I
Sbjct: 147 KLWKMPSLSEFLSLFGTETCPAIGSAI 173


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 600 FSILNSIEKLL*LYL*AKIFPMFVYKKVSFNYSKLCH 490
           F+ILN   + L  YL  K       ++V  ++SK+C+
Sbjct: 192 FAILNKQIRFLNQYLRLKPEGRISNRRVFISFSKICY 228


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 600 FSILNSIEKLL*LYL*AKIFPMFVYKKVSFNYSKLCH 490
           F+ILN   + L  YL  K       ++V  ++SK+C+
Sbjct: 210 FAILNKQIRFLNQYLRLKPEGRISNRRVFISFSKICY 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,574
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)