Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0448
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 33 0.19
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 33 0.19
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 32 0.33
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 0.77
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 31 0.77
SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 29 3.1
SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4) 28 5.4
SB_42834| Best HMM Match : C2 (HMM E-Value=3.7e-20) 28 7.1
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 28 7.1
SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 34.7 bits (76), Expect = 0.062
Identities = 25/121 (20%), Positives = 57/121 (47%)
Frame = -3
Query: 565 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 386
+Q Q Q + Q+++ QQQ + QL+ + + + ++Q L++ ++ ++
Sbjct: 10 QQQQQQLQQQQQQQQLQQQQQQQQQLQQQQQQQQLLQQQQQQQQQLQQQQQQQQQLQQQQ 69
Query: 385 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRR 206
+ +L++ QP ++ ++ R Q + QQ R ++QQ RL+Q ++
Sbjct: 70 QQQPRLQQQQQQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQ-PRLQQQQQ 128
Query: 205 Q 203
Q
Sbjct: 129 Q 129
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/122 (18%), Positives = 61/122 (50%)
Frame = -3
Query: 565 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 386
+Q Q+Q++ Q+++ QQQ + L+ + + + + ++Q L++ + ++
Sbjct: 21 QQQQLQQQQQQQQQL-QQQQQQQQLLQQQQQQQQQLQQQQQQQQQLQQQQQQQPRLQQQQ 79
Query: 385 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRR 206
+ +L++ QP ++ ++ + + Q + QQ + +Q+QQ RL+Q ++
Sbjct: 80 QQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQPRLQQQQQQP--RLKQQQQ 137
Query: 205 QR 200
Q+
Sbjct: 138 QQ 139
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/118 (24%), Positives = 61/118 (51%)
Frame = -3
Query: 565 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 386
+Q Q++LQR+R QQQ + Q ++ R R +++ ++Q L++ ++ + +K
Sbjct: 1532 QQQLQQQQLQRQREL-QQQQQQQQQQQLQRQRELQQQQHLQQQRQLQQ----QQQYIEQK 1586
Query: 385 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQH 212
I ++QL ++ + ++ + Q++ + Q L QQ + +Q+Q RL QH
Sbjct: 1587 IRQQQLAHQQYT--NQQQQQILYQQQQQLQHQQQQQQLQQQQQLQQQQ-----RLPQH 1637
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/118 (24%), Positives = 61/118 (51%)
Frame = -3
Query: 565 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 386
+Q Q++LQR+R QQQ + Q ++ R R +++ ++Q L++ ++ + +K
Sbjct: 186 QQQLQQQQLQRQREL-QQQQQQQQQQQLQRQRELQQQQHLQQQRQLQQ----QQQYIEQK 240
Query: 385 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQH 212
I ++QL ++ + ++ + Q++ + Q L QQ + +Q+Q RL QH
Sbjct: 241 IRQQQLAHQQYT--NQQQQQILYQQQQQLQHQQQQQQLQQQQQLQQQQ-----RLPQH 291
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/105 (20%), Positives = 55/105 (52%)
Frame = -3
Query: 463 RRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*H 284
R+ ++ +E+ R+++ + + +K+L++Q E+ Q E+RH++ + ++ +
Sbjct: 353 RKLIQQQEELKQRELLKQQEVKKQQKLLKQQ-ERLK-QQEEIRHRQLLKEQEELKHRKLL 410
Query: 283 MSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPKTQ 149
QHK+ QE++ + E+ ++Q H++ E K + + Q
Sbjct: 411 QEQQKLQHKKLQEEKLKHQKQEEEQQQLQHHKQEEEQLKHQQEQQ 455
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 285 CYWPSIFVRRCTIVRLCRISGCDQDHFS 368
C P+ RRC R C +SGC + H S
Sbjct: 785 CLLPNHISRRCKTYRACLVSGCSEKHHS 812
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -3
Query: 538 QRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKW 359
+R+R+ + + R ++L R + M REQ +LRK +I +RL + R++ ++W
Sbjct: 134 RRQRAKMEAEQRRQAELEKQRQQQMEM---EREQEVLRKQMIQQRLQAQIEAERQRQKEW 190
Query: 358 SWSQ-PEMRHKRTMVQRRTNMLGQ 290
+ E+ +++ + Q N L Q
Sbjct: 191 QKRKVEELLNQKGLEQDIVNNLKQ 214
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 285 CYWPSIFVRRCTIVRLCRISGCDQDHFS 368
C P+ RRC + C +SGC + H S
Sbjct: 154 CLLPNHISRRCKTYKACLVSGCSEKHHS 181
>SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 463 RRWLEHREQSMLRKMVIHERLWTSKKILRKQLEK 362
R W+ +E + + + LW S+KIL+ QLEK
Sbjct: 169 RSWISEQELEDIDEEIRRLELWLSRKILKHQLEK 202
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -3
Query: 343 EMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKK 164
+ +H+R Q+ Q H Q+H+RR +Q ++H+R++ RER + ++
Sbjct: 154 DKKHQRRHRQKHQRRNRQKHQRRQRQEHQRRHRRQHQRRHRQKHQRRQHQRRER-QKQQQ 212
Query: 163 RPKTQ 149
R K Q
Sbjct: 213 RQKQQ 217
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 459 RRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCLQDHQSCSIFC 596
R I P +++C L C C G +RC C++ H C++ C
Sbjct: 785 RWITIPEVSKACSELTKCSCKGVCTRCK------CIKAHLECTLLC 824
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/109 (25%), Positives = 54/109 (49%)
Frame = -3
Query: 565 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 386
RQ Q QR+ QR+R +Q+ R + R + + R+ HR++ R +R ++
Sbjct: 9 RQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRHRQRQRQR-----QRQRQRQR 63
Query: 385 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQ 239
++Q ++ Q + + +R QR+ L Q L Q+ ++RQ+Q+
Sbjct: 64 QRQRQRQRQRQRQRQRQRQR---QRQRQRLRQ--RQRLRQRQRQRQQQR 107
Score = 29.5 bits (63), Expect = 2.3
Identities = 28/101 (27%), Positives = 45/101 (44%)
Frame = -3
Query: 334 HKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPK 155
HK+ QR+ Q Q+ ++RQ Q+ R Q +RQR HR+R +++ +
Sbjct: 2 HKQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQ-RQRQRQRQRQRHRQRQRQRQRQRQ 60
Query: 154 TQLD*WF*LPQQEPR*RGCKPREQLRGDHQRGLRLQRTEQR 32
Q +Q R R + + Q + QR + QR QR
Sbjct: 61 RQ--------RQRQRQRQRQRQRQRQRQRQRQRQRQRLRQR 93
>SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1422
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = -3
Query: 436 SMLRKMVIH-ERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQH 260
+++ +IH E +T+ + +Q+E Q E+ H+R ++ +R ++ + QQH
Sbjct: 1105 ALMHPFLIHRESPFTAHHLGDRQVEMMRERQ-ELLHQRLIMDQREHIKAREEEWQRRQQH 1163
Query: 259 KRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPKTQ 149
R QE++ L Q+R Q E + +RP ++
Sbjct: 1164 LR-QEKEDRQRELSQYRHQVLHRHEHMGMEPRRPASK 1199
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 29.1 bits (62), Expect = 3.1
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Frame = -3
Query: 592 KILQD*WSWRQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVI 413
K L++ W RQ Q+ R+ + R + + + +LR R + M R L R+ R+ +
Sbjct: 253 KRLREQWGRRQRQLAREKRIRR---ENKRKERERLRRERVKLMER-LRRRKLERARR-IR 307
Query: 412 HERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS 233
ER+ K++ +L K + KR ++ M + +Q +RR+ Q +
Sbjct: 308 KERM---KRLQMMKLRKILLERKRRAAKRARIRHEKLMRKLRLQQKMEEQRRRRRAHQIA 364
Query: 232 **RLEQHR-RQRCGHRERCEL 173
L+ R RQR G + R +
Sbjct: 365 QRLLKLKRERQRAGAKRRAAI 385
>SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4)
Length = 330
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 226 RLEQHRRQRCGHRERCELSKKRPKTQ 149
R H R+ C +R+R L+ KRPKT+
Sbjct: 192 RHSHHYRRICRYRQRRPLTPKRPKTR 217
>SB_42834| Best HMM Match : C2 (HMM E-Value=3.7e-20)
Length = 808
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 274 LVQQHKRRQEQQWS**RLEQHRRQRCGHRE 185
L QQ ++Q+QQ +L+QH++Q+ HR+
Sbjct: 38 LKQQQMQKQQQQHLQQQLQQHQQQQMQHRD 67
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 336 GISVRWCSGVRICWASSI*VCWCSSIRDGRSSNGLSEDWSST 211
G++ WCS R C I CS G SS+ ++ +W T
Sbjct: 932 GVTCAWCSWFRFCRGCLI---KCSDQEFGNSSSYIAIEWDPT 970
>SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 585 CRTDGLGDNRRCSVSYSG 532
CR GLG RCS +Y+G
Sbjct: 281 CRVAGLGSGNRCSGAYTG 298
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,321,153
Number of Sequences: 59808
Number of extensions: 266105
Number of successful extensions: 1035
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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