BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0445 (637 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC3A11.10c |||dipeptidyl aminopeptidase |Schizosaccharomyces p... 29 0.74 SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 4.0 SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 26 5.2 SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 5.2 SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 25 6.9 SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 6.9 SPAC631.01c |acp2||F-actin capping protein beta subunit |Schizos... 25 9.1 >SPAC3A11.10c |||dipeptidyl aminopeptidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 409 Score = 28.7 bits (61), Expect = 0.74 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2 Query: 396 EASTSTVLRVDVILDIFLSYPPQVSLDNHFSYTKY 292 EA T T+ ++DV+ + L YP SL +H K+ Sbjct: 133 EAVTQTLQQIDVVKRMALYYPKTFSLTDHSGKVKF 167 >SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1|Schizosaccharomyces pombe|chr 2|||Manual Length = 775 Score = 26.2 bits (55), Expect = 4.0 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = +1 Query: 505 SDAAELENHPAQNPSKRTDQQTAGADRDCT 594 +D E EN PA N + + RDCT Sbjct: 504 TDDVEKENRPASNDANSMPPYIISSSRDCT 533 >SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr 1|||Manual Length = 1517 Score = 25.8 bits (54), Expect = 5.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 594 GAVPIGTSCLLISPFGRILCRV 529 G VP+ T +++P R LCRV Sbjct: 1270 GMVPVSTQLAIVNPDTRELCRV 1291 >SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1023 Score = 25.8 bits (54), Expect = 5.2 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -1 Query: 355 RHFPVVSTSSLSRQSFQLHK 296 R P S SSLSR +FQ HK Sbjct: 36 RALPDSSLSSLSRSTFQFHK 55 >SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 923 Score = 25.4 bits (53), Expect = 6.9 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -2 Query: 402 LMEASTSTVLRVDVILDIFLS 340 L EAS ST + +D++LD +L+ Sbjct: 280 LSEASNSTSMNMDILLDSYLT 300 >SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1436 Score = 25.4 bits (53), Expect = 6.9 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = -2 Query: 450 GYPISALGTYEIPVAMLMEASTSTVLRVD------VILDIFLSYPPQVSLDNHFS 304 GY ++ TY P +L S V +D VI+++ PP LDNHFS Sbjct: 1303 GYSLTGTPTYMAPELILGNPS-ERVGAMDIWSLGCVIVEMATGSPPWPRLDNHFS 1356 >SPAC631.01c |acp2||F-actin capping protein beta subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 268 Score = 25.0 bits (52), Expect = 9.1 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 439 YRISGRLVT*MSRSSEERHNQRSDAAELENHPAQNPSKR 555 YR++ ++ +S SEE+ S A L H + S+R Sbjct: 162 YRLTSTIILFLSSGSEEQSALPSKALNLSGHLTRQTSQR 200 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,405,551 Number of Sequences: 5004 Number of extensions: 43358 Number of successful extensions: 137 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 137 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 283719918 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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