Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0444
         (362 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2Y966 Cluster: 4-alpha-glucanotransferase; n=4; Proteo...    34   0.89 
UniRef50_A0C7B5 Cluster: Chromosome undetermined scaffold_155, w...    33   1.6  
UniRef50_Q3J7X4 Cluster: Peptidase M48, Ste24p precursor; n=1; N...    32   2.7  
UniRef50_P54462 Cluster: UPF0004 protein yqeV; n=38; Bacillales|...    32   2.7  
UniRef50_A6DX44 Cluster: Chemotaxis methylesterase, CheB2; n=1; ...    32   3.6  
UniRef50_A7S7Y5 Cluster: Predicted protein; n=1; Nematostella ve...    31   4.8  
UniRef50_Q7UYF9 Cluster: Sensor protein; n=1; Pirellula sp.|Rep:...    31   8.3  

>UniRef50_Q2Y966 Cluster: 4-alpha-glucanotransferase; n=4;
            Proteobacteria|Rep: 4-alpha-glucanotransferase -
            Nitrosospira multiformis (strain ATCC 25196 / NCIMB
            11849)
          Length = 1730

 Score = 33.9 bits (74), Expect = 0.89
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +2

Query: 104  CAKNLFDNMYTGFCFLLISICALSFAKELDKKQREKDFVPLKYPG 238
            CA++L +N+  G   L ++  AL+F +E ++  R+ D++PLK  G
Sbjct: 1584 CAQHLMENLRDGRIKLYLTWKALTFRREHEQLFRDGDYLPLKAHG 1628


>UniRef50_A0C7B5 Cluster: Chromosome undetermined scaffold_155,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_155,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 899

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 65  IRHEAKSNASQVRCAKNLFDNMYTGFCFLLISICALSFAKELDKKQREKDFVPLKYPGPF 244
           +R   K+N SQ+ C +NLFDN    F   ++ I     +    ++  + + +  K P  F
Sbjct: 240 LRGLLKNNFSQIECEQNLFDNDIYAFLLSMLQIYKKGLSILQLQQMLDNESLLTKLPFEF 299

Query: 245 QDVGNRY 265
           Q  G  Y
Sbjct: 300 QIHGKSY 306


>UniRef50_Q3J7X4 Cluster: Peptidase M48, Ste24p precursor; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: Peptidase M48,
           Ste24p precursor - Nitrosococcus oceani (strain ATCC
           19707 / NCIMB 11848)
          Length = 484

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -2

Query: 157 YKQKTKSGVHIVEQVFSTTYLRGV*FRLVPNSCSPG 50
           + ++ ++ V I+E    TTY++ + FRLV NS +PG
Sbjct: 54  FMRRLRNSVTIIEDPEITTYIQSLGFRLVANSDNPG 89


>UniRef50_P54462 Cluster: UPF0004 protein yqeV; n=38;
           Bacillales|Rep: UPF0004 protein yqeV - Bacillus subtilis
          Length = 451

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +3

Query: 72  TRRNQTPLKYVVLKTCSTICTPDFVFCLYPSAP*ALLRSLIRSKEKKILYRLSTPVLSRT 251
           T R +  LK  + + C+  CT    FC+ P A     R L+RS++ + + + +  ++   
Sbjct: 140 TDRTRASLK--IQEGCNNFCT----FCIIPWA-----RGLLRSRDPEEVIKQAQQLVDAG 188

Query: 252 W--VIGTGVRTGGYPEKGRAKTFGPL 323
           +  ++ TG+ TGGY E  +   F  L
Sbjct: 189 YKEIVLTGIHTGGYGEDMKDYNFAKL 214


>UniRef50_A6DX44 Cluster: Chemotaxis methylesterase, CheB2; n=1;
           Roseovarius sp. TM1035|Rep: Chemotaxis methylesterase,
           CheB2 - Roseovarius sp. TM1035
          Length = 376

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3

Query: 225 LSTPVLSRTWVIGTGVRTGGYPEKG 299
           L+ PVLSR WVI  G  TGG    G
Sbjct: 159 LAAPVLSRDWVIALGASTGGVQALG 183


>UniRef50_A7S7Y5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 863

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 20/70 (28%), Positives = 31/70 (44%)
 Frame = +2

Query: 44  WIPRAAGIRHEAKSNASQVRCAKNLFDNMYTGFCFLLISICALSFAKELDKKQREKDFVP 223
           W      +RH AK  AS+V    ++F N+Y   C+L+     L   K L  +  ++  V 
Sbjct: 381 WQEAPTAVRHGAKGKASKVLLTSDMFGNIYV--CYLVKHTNRLRLLKLLSNEDSKQLIVV 438

Query: 224 LKYPGPFQDV 253
                P +DV
Sbjct: 439 PAEDIPAKDV 448


>UniRef50_Q7UYF9 Cluster: Sensor protein; n=1; Pirellula sp.|Rep:
           Sensor protein - Rhodopirellula baltica
          Length = 1170

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 160 GYKQKTKSGVHIVEQVFSTTYLRGV*FRLVPNSCSPGDPLVXER 29
           G+  +  SGV ++ Q  +   LRGV F LV +  SP DP   ++
Sbjct: 75  GFDLREVSGVKLLAQTRAHAELRGVPFVLVADEASPIDPTTWQQ 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,099,095
Number of Sequences: 1657284
Number of extensions: 6840340
Number of successful extensions: 18548
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18546
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)