Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0444
         (362 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    30   0.57 
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    30   0.57 
Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical pr...    27   3.0  
Z49913-4|CAA90147.1|  498|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 80  KSNASQVRCAKNLFDNMYTGFCFLLISICALSFAKELDKKQREKDFVPLKYP 235
           KS    +    N++   +   CFL ++IC  SFA  +D++   K  + LK+P
Sbjct: 124 KSTYFYIYLKANIYLFRFAMLCFLTLNICTYSFA--IDQQTVNKYSLSLKFP 173


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 80  KSNASQVRCAKNLFDNMYTGFCFLLISICALSFAKELDKKQREKDFVPLKYP 235
           KS    +    N++   +   CFL ++IC  SFA  +D++   K  + LK+P
Sbjct: 124 KSTYFYIYLKANIYLFRFAMLCFLTLNICTYSFA--IDQQTVNKYSLSLKFP 173


>Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical
           protein F36D1.6 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 228 STPVLSRTWVIGTGVRTGGYPEKGRAKTFG 317
           STP LS    IG GV   GY + G  K  G
Sbjct: 183 STPCLSDEVNIGNGVYVHGYEDNGNGKNNG 212


>Z49913-4|CAA90147.1|  498|Caenorhabditis elegans Hypothetical
           protein ZK938.5 protein.
          Length = 498

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 47  IPRAAGIRHEAKSNASQVRCAKNLFDNMYTGFCFLLISICALSFAKELDKKQ 202
           +PRA+       SN  Q+     +F ++Y+ F  L I IC L  A +  K+Q
Sbjct: 37  VPRASEKNELGDSNVQQI-----IFISLYSVFVALAIGICCLIKAYKSKKRQ 83


>Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical
           protein F54C8.6 protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +2

Query: 119 FDNMYTGFCFLLISICALSFAKELDKKQREKDFVPLKYPGPFQDVGNRYGSPD 277
           F ++  GF      I  +SF K L     +  F    + GPF  + +    PD
Sbjct: 99  FPSVLLGFAIFFFGITFISFIKLLRGVSTQPSFFCRYFSGPFSPLFDALCEPD 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,959,337
Number of Sequences: 27780
Number of extensions: 161026
Number of successful extensions: 435
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)