Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0442
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 177 YNDVQISLNSFDKSRYCVIDDLLSAPRRSHLTI 275
           +ND +  +N F K     ID+  S   ++H+ I
Sbjct: 626 HNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 177 YNDVQISLNSFDKSRYCVIDDLLSAPRRSHLTI 275
           +ND +  +N F K     ID+  S   ++H+ I
Sbjct: 626 HNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 177 YNDVQISLNSFDKSRYCVIDDLLSAPRRSHLTI 275
           +ND +  +N F K     ID+  S   ++H+ I
Sbjct: 626 HNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 177 YNDVQISLNSFDKSRYCVIDDLLSAPRRSHLTI 275
           +ND +  +N F K     ID+  S   ++H+ I
Sbjct: 626 HNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 238 SSITQYRLLSKEFKDIW 188
           + I  Y  L KEF+++W
Sbjct: 156 ADIQNYATLIKEFREVW 172


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 94  KQECKCHGMSGSCTVKTCWMRLP 26
           K +CK      SCTV+T   R P
Sbjct: 138 KPDCKDESDENSCTVETDPNRAP 160


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
 Frame = +2

Query: 377 INDASMETVNIFLRA---SPSD 433
           +ND + + +N+FL+A   SP+D
Sbjct: 362 MNDEAQQEINMFLKATEMSPTD 383


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 94  KQECKCHGMSGSCTVKT 44
           K +CK      SCTV+T
Sbjct: 131 KPDCKDESDENSCTVET 147


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/17 (35%), Positives = 8/17 (47%)
 Frame = +1

Query: 304  WAGRHRTWTDHKSCHRD 354
            W   H  W ++  CH D
Sbjct: 2271 WNKDHCDWPENTECHPD 2287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,769
Number of Sequences: 336
Number of extensions: 3240
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)