Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0442
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_531| Best HMM Match : wnt (HMM E-Value=0) 58 6e-09
SB_1139| Best HMM Match : wnt (HMM E-Value=0) 56 2e-08
SB_42523| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_22258| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_8923| Best HMM Match : wnt (HMM E-Value=2.5e-22) 55 4e-08
SB_38182| Best HMM Match : wnt (HMM E-Value=0) 55 5e-08
SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31) 55 5e-08
SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_15165| Best HMM Match : wnt (HMM E-Value=6e-28) 55 5e-08
SB_14585| Best HMM Match : wnt (HMM E-Value=9.3e-17) 55 5e-08
SB_4360| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_25278| Best HMM Match : wnt (HMM E-Value=8.9e-18) 54 1e-07
SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18) 53 2e-07
SB_5367| Best HMM Match : wnt (HMM E-Value=0) 51 9e-07
SB_40347| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_10627| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46626| Best HMM Match : wnt (HMM E-Value=0) 39 0.003
SB_6659| Best HMM Match : HC2 (HMM E-Value=0.78) 30 1.8
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 28 5.4
SB_45509| Best HMM Match : PX (HMM E-Value=0.063) 28 7.1
SB_31415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
>SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ M ECKCHG+S +CTVKTCW RLP FR VGD
Sbjct: 199 VRNNMIVECKCHGLSEACTVKTCWKRLPDFRLVGD 233
>SB_531| Best HMM Match : wnt (HMM E-Value=0)
Length = 646
Score = 58.0 bits (134), Expect = 6e-09
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ M +CKCHG+SGSC +KTCW LP+FR VGD
Sbjct: 498 VKKFMDLQCKCHGVSGSCNIKTCWRALPNFRIVGD 532
>SB_1139| Best HMM Match : wnt (HMM E-Value=0)
Length = 500
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
V+T M +CKCHG+SGSC+V+TCW + SFR VG
Sbjct: 333 VKTNMSLDCKCHGVSGSCSVRTCWKSISSFRIVG 366
>SB_42523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = -2
Query: 121 LLQHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
+ Q V+ +K+EC+CHG+SGSC+ +TCW +L SF VG
Sbjct: 95 VFQAVRATLKRECRCHGISGSCSTRTCWRKLSSFAEVG 132
>SB_22258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ +KQ+CKCHG+SG C+ K+CW LP F +GD
Sbjct: 88 VKKTLKQQCKCHGLSGGCSSKSCWKTLPLFSEIGD 122
>SB_8923| Best HMM Match : wnt (HMM E-Value=2.5e-22)
Length = 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ M+++C+CHG+S +C +KTCW LP+FRSV D
Sbjct: 2 VKNHMEKKCRCHGLSQTCQMKTCWWELPAFRSVSD 36
>SB_38182| Best HMM Match : wnt (HMM E-Value=0)
Length = 289
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ +KQ+CKCHG+SG C+ K+CW LP F +GD
Sbjct: 132 VKKTLKQQCKCHGVSGGCSSKSCWKTLPLFSEIGD 166
>SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31)
Length = 731
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ +KQ+CKCHG+SG C+ K+CW LP F +GD
Sbjct: 574 VKKTLKQQCKCHGVSGGCSSKSCWKTLPLFSEIGD 608
>SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 54.8 bits (126), Expect = 5e-08
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = -2
Query: 91 QECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++CKCHG+SGSC++KTCWM+ +FR +GD
Sbjct: 483 RKCKCHGLSGSCSMKTCWMQQANFRQIGD 511
>SB_15165| Best HMM Match : wnt (HMM E-Value=6e-28)
Length = 224
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ +KQ+CKCHG+SG C+ K+CW LP F +GD
Sbjct: 67 VKKTLKQQCKCHGVSGGCSSKSCWKTLPLFSEIGD 101
>SB_14585| Best HMM Match : wnt (HMM E-Value=9.3e-17)
Length = 157
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V+ +KQ+CKCHG+SG C+ K+CW LP F +GD
Sbjct: 51 VKKTLKQQCKCHGVSGGCSSKSCWKTLPLFSEIGD 85
>SB_4360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2
Query: 94 KQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
K +CKCHGM GSC+VKTCW +P R +GD
Sbjct: 18 KTKCKCHGMCGSCSVKTCWKTVPDIREIGD 47
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 61 SCTVKTCWMRLPSFRSVGD 5
+C +KTCW LP+FRSV D
Sbjct: 136 TCQMKTCWWELPAFRSVSD 154
>SB_25278| Best HMM Match : wnt (HMM E-Value=8.9e-18)
Length = 167
Score = 53.6 bits (123), Expect = 1e-07
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++ + CKCHG SGSC KTCW +PSFR VG+
Sbjct: 2 IRNNLDLSCKCHGPSGSCNTKTCWKSVPSFRMVGE 36
>SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18)
Length = 354
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
V+ MK EC+CHG S SC +TCW LP+FR +G
Sbjct: 132 VKESMKLECRCHGPSSSCATETCWNALPAFREIG 165
>SB_5367| Best HMM Match : wnt (HMM E-Value=0)
Length = 367
Score = 50.8 bits (116), Expect = 9e-07
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -2
Query: 88 ECKCHGMSGSCTVKTCWMRLPSFRSVGDS 2
ECKCHG+ GSC +KTCW +L FR +G++
Sbjct: 213 ECKCHGVCGSCNLKTCWRQLVEFREIGNA 241
>SB_40347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -2
Query: 121 LLQHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGDS 2
+L V M+ +C+CHG+S SC VKTC LP F VG++
Sbjct: 243 MLDAVLALMRVQCRCHGVSSSCAVKTCSKSLPKFEEVGEA 282
>SB_10627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V + ++ C+CHG+SG CT KTC RL FR V D
Sbjct: 202 VHSRLEFHCRCHGVSGGCTAKTCIRRLGDFRLVAD 236
>SB_46626| Best HMM Match : wnt (HMM E-Value=0)
Length = 359
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
V + EC CHG S SC +TC LPS R+V +
Sbjct: 232 VNRSLLTECTCHGPSASCVTRTCSQALPSPRAVSN 266
>SB_6659| Best HMM Match : HC2 (HMM E-Value=0.78)
Length = 245
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 274 SSKLLQIVKRWAGRHRTWTDHKSCHRDIHHSKKVDK 381
+ K+L KRW R+W+ H+ C + +KK+ K
Sbjct: 2 AKKILDQPKRWP--KRSWSTHRRCQNVLEETKKIAK 35
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 389 SRHLSTFLE*WMSLWHDL*SVHVR*RPAHLFTICNNLLDREMRSTG 252
SRHL T++ M+ W + VH R LLD+ +RS G
Sbjct: 446 SRHLETYIGSHMAGWEIMEKVHTEFREQVAALAVEKLLDQFVRSKG 491
>SB_45509| Best HMM Match : PX (HMM E-Value=0.063)
Length = 556
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 21 KLGSLIQQVFTVHEPDMPWHLHSCFISVCTC 113
K+G I Q++++H P+M H H+ + +CTC
Sbjct: 73 KIGPCICQIWSIHIPNMV-HAHAKY-GLCTC 101
>SB_31415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 406 IYC----FHARVIYLPS*NDGCLCGMIYDRSTCGDD 311
+YC FH LPS +G LC +++R CGDD
Sbjct: 75 LYCDGRVFHVGDGQLPS--EGYLCSGLFERLLCGDD 108
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,131,678
Number of Sequences: 59808
Number of extensions: 444990
Number of successful extensions: 1013
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -