Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0442
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.0  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 6   SPTDLKLGSLIQQVFTVHEPDMP 74
           +PT LK  ++I+Q+F  HEP  P
Sbjct: 359 NPTALK--TIIEQLFPNHEPQTP 379


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 482 PPIYMYMNKYRRRGSTNRLDSLVGKYLLFPCSRH 381
           P IY YMN   R G    L  + G   L  C RH
Sbjct: 564 PIIYCYMNARFRSGFILVLHGVPGLQQLCCCIRH 597


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 85  CKCHGMSGSCTVKT 44
           CKC+G +  CT  T
Sbjct: 282 CKCNGHASECTTST 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,107
Number of Sequences: 2352
Number of extensions: 13909
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)