Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0442
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72942-1|CAA51447.1|  335|Caenorhabditis elegans Wnt-1 protein.        58   7e-09
X72941-1|CAA51446.1|  372|Caenorhabditis elegans Wnt-1 protein p...    58   7e-09
AF025463-6|AAO38623.1|  332|Caenorhabditis elegans C. elegans wn...    58   7e-09
AF025463-5|AAB71011.1|  372|Caenorhabditis elegans C. elegans wn...    58   7e-09
Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical pr...    54   6e-08
Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical pr...    52   3e-07
AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog p...    52   3e-07
X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein p...    52   4e-07
U41996-3|AAA83472.2|  362|Caenorhabditis elegans More of ms prot...    50   2e-06
AF013952-1|AAC47749.1|  362|Caenorhabditis elegans mom-2 protein.      50   2e-06
U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein pro...    44   1e-04
U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein pro...    44   1e-04
AC006627-2|AAT68899.1|  169|Caenorhabditis elegans Abnormal cell...    44   1e-04
AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell...    44   1e-04
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL132948-45|CAD31822.2|  542|Caenorhabditis elegans Hypothetical...    29   2.1  

>X72942-1|CAA51447.1|  335|Caenorhabditis elegans Wnt-1 protein.
          Length = 335

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = -2

Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           Q ++  +++ECKCHGMSGSC ++TCW  LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250


>X72941-1|CAA51446.1|  372|Caenorhabditis elegans Wnt-1 protein
           protein.
          Length = 372

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = -2

Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           Q ++  +++ECKCHGMSGSC ++TCW  LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250


>AF025463-6|AAO38623.1|  332|Caenorhabditis elegans C. elegans wnt
           family protein 1,isoform b protein.
          Length = 332

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = -2

Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           Q ++  +++ECKCHGMSGSC ++TCW  LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250


>AF025463-5|AAB71011.1|  372|Caenorhabditis elegans C. elegans wnt
           family protein 1,isoform a protein.
          Length = 372

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = -2

Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           Q ++  +++ECKCHGMSGSC ++TCW  LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250


>Z68301-1|CAA92624.1|  360|Caenorhabditis elegans Hypothetical
           protein W01B6.1 protein.
          Length = 360

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -2

Query: 94  KQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           K +CKCHG+SG+C +KTCWM+LPS   VG
Sbjct: 210 KPKCKCHGVSGACNMKTCWMQLPSMEQVG 238


>Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical
           protein W08D2.1 protein.
          Length = 393

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/69 (30%), Positives = 38/69 (55%)
 Frame = -2

Query: 211 SKEFKDIWTSL*TPVNDRIN*LLPYAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTCWMR 32
           +K+F D W +        +  L+    + V  + +   ++++C+CHG+SGSC  KTCW++
Sbjct: 206 AKKFLDDWETAQFDKTKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSCEFKTCWLQ 265

Query: 31  LPSFRSVGD 5
           +  F  V D
Sbjct: 266 MQKFSQVSD 274


>AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog
           protein.
          Length = 393

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/69 (30%), Positives = 38/69 (55%)
 Frame = -2

Query: 211 SKEFKDIWTSL*TPVNDRIN*LLPYAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTCWMR 32
           +K+F D W +        +  L+    + V  + +   ++++C+CHG+SGSC  KTCW++
Sbjct: 206 AKKFLDDWETAQFDKTKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSCEFKTCWLQ 265

Query: 31  LPSFRSVGD 5
           +  F  V D
Sbjct: 266 MQKFSQVSD 274


>X72943-1|CAA51448.1|  360|Caenorhabditis elegans Wnt-2 protein
           protein.
          Length = 360

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 94  KQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
           K +CKCHG+SG C +KTCW+ LPS   VG
Sbjct: 210 KPKCKCHGVSGRCNMKTCWIELPSMEQVG 238


>U41996-3|AAA83472.2|  362|Caenorhabditis elegans More of ms protein
           2 protein.
          Length = 362

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = -2

Query: 97  MKQECKCHGMSGSCTVKTCWMRLPSF 20
           M +ECKCHG+SGSC  KTCW  +P F
Sbjct: 213 MNKECKCHGVSGSCVTKTCWKVMPKF 238


>AF013952-1|AAC47749.1|  362|Caenorhabditis elegans mom-2 protein.
          Length = 362

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = -2

Query: 97  MKQECKCHGMSGSCTVKTCWMRLPSF 20
           M +ECKCHG+SGSC  KTCW  +P F
Sbjct: 213 MNKECKCHGVSGSCVTKTCWKVMPKF 238


>U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
           ++  +   CKCHG+SGSC  KTCW R  +   + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239


>U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
           ++  +   CKCHG+SGSC  KTCW R  +   + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239


>AC006627-2|AAT68899.1|  169|Caenorhabditis elegans Abnormal cell
           lineage protein 44,isoform b protein.
          Length = 169

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
           ++  +   CKCHG+SGSC  KTCW R  +   + D
Sbjct: 26  IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 60


>AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell
           lineage protein 44,isoform a protein.
          Length = 348

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
           ++  +   CKCHG+SGSC  KTCW R  +   + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 139 YAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTC 41
           Y +++  L+H QT +K+  +CHG    CT   C
Sbjct: 235 YTQNIDTLEH-QTGIKRVVECHGSFSKCTCTRC 266


>AL132948-45|CAD31822.2|  542|Caenorhabditis elegans Hypothetical
           protein Y39B6A.25 protein.
          Length = 542

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 319 RTWTDH-KSCHRDIHHSKKVDK*REHGNSKYFPTSESKRFVE--PRRRYL 459
           R+W  H K  + +    +  ++  EHG+  YFPTS  K  +   PR++Y+
Sbjct: 261 RSWETHCKKMNEEFDDDEDFEE--EHGDGDYFPTSIQKPHLPEIPRQQYI 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,217,369
Number of Sequences: 27780
Number of extensions: 320911
Number of successful extensions: 812
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)