Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0439
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094697-1|AAM11050.1|  182|Drosophila melanogaster GH10361p pro...    31   1.2  
AE014297-281|AAF52005.3|  182|Drosophila melanogaster CG1081-PB,...    31   1.2  
AE014297-280|AAF52004.3|  182|Drosophila melanogaster CG1081-PA,...    31   1.2  

>AY094697-1|AAM11050.1|  182|Drosophila melanogaster GH10361p
           protein.
          Length = 182

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -3

Query: 221 FHIQPIQFSFNVHGYYRVFSVTTEINYAFAIIKAL 117
           + I P+Q+S + HGY  V+S+T++   +F ++K +
Sbjct: 66  YSIFPVQYSMDYHGYVLVYSITSQ--KSFEVVKII 98


>AE014297-281|AAF52005.3|  182|Drosophila melanogaster CG1081-PB,
           isoform B protein.
          Length = 182

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -3

Query: 221 FHIQPIQFSFNVHGYYRVFSVTTEINYAFAIIKAL 117
           + I P+Q+S + HGY  V+S+T++   +F ++K +
Sbjct: 66  YSIFPVQYSMDYHGYVLVYSITSQ--KSFEVVKII 98


>AE014297-280|AAF52004.3|  182|Drosophila melanogaster CG1081-PA,
           isoform A protein.
          Length = 182

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -3

Query: 221 FHIQPIQFSFNVHGYYRVFSVTTEINYAFAIIKAL 117
           + I P+Q+S + HGY  V+S+T++   +F ++K +
Sbjct: 66  YSIFPVQYSMDYHGYVLVYSITSQ--KSFEVVKII 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,571,058
Number of Sequences: 53049
Number of extensions: 555030
Number of successful extensions: 1158
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)