Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0438
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.0  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 92  CRSSIFHQYQYLECCYSK*FSNFL*EKFIF 3
           C S  F  + Y +C  ++ + N + +KF++
Sbjct: 164 CNSVTFSNFGYKQCVENRKWQNKVIQKFLW 193


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 92  CRSSIFHQYQYLECCYSK*FSNFL*EKFIF 3
           C S  F  + Y +C  ++ + N + +KF++
Sbjct: 397 CNSVTFSNFGYKQCVENRKWQNKVIQKFLW 426


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 92  CRSSIFHQYQYLECCYSK*FSNFL*EKFIF 3
           C S  F  + Y +C  ++ + N + +KF++
Sbjct: 397 CNSVTFSNFGYKQCVENRKWQNKVIQKFLW 426


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 4/15 (26%), Positives = 10/15 (66%)
 Frame = +2

Query: 173 VWIWILTIPKYTLCF 217
           +W+W++ I    +C+
Sbjct: 132 IWVWLINISATYICY 146


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 4/15 (26%), Positives = 10/15 (66%)
 Frame = +2

Query: 173 VWIWILTIPKYTLCF 217
           +W+W++ I    +C+
Sbjct: 365 IWVWLINISATYICY 379


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 4/15 (26%), Positives = 10/15 (66%)
 Frame = +2

Query: 173 VWIWILTIPKYTLCF 217
           +W+W++ I    +C+
Sbjct: 365 IWVWLINISATYICY 379


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 600 PPYFSGLCVNIDCKRANI 653
           PP ++  C+N  C+R +I
Sbjct: 53  PPQWTWQCINQRCERRHI 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,763
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)