Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0435
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    37   0.39 
UniRef50_A1W5A6 Cluster: Membrane protein-like protein; n=8; Bur...    34   3.6  
UniRef50_Q38AX3 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.1 bits (82), Expect = 0.39
 Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
 Frame = -1

Query: 379 KKAY*PKS--IEFLAESSPRAAKRFGGRFREAMLLLGEILANS 257
           ++A  PK+  ++FLA SS  +  R  GRF EA+LLLG +LANS
Sbjct: 65  RRATNPKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANS 107


>UniRef50_A1W5A6 Cluster: Membrane protein-like protein; n=8;
           Burkholderiales|Rep: Membrane protein-like protein -
           Acidovorax sp. (strain JS42)
          Length = 138

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 218 P*GYWQYLKSLPIIMRFCG--HKRRYLYKIWLNILTLIYFT 102
           P G W  LK+LP+ +   G   +R Y Y+ W+++L  +YFT
Sbjct: 48  PGGSWLALKALPLAVPLAGLLKRRMYTYR-WVSLLVWLYFT 87


>UniRef50_Q38AX3 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma brucei|Rep: Putative uncharacterized protein
            - Trypanosoma brucei
          Length = 1594

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 346  LAESSPRAAKRFGGRFREAMLLLGEILANS--HSSSIGRDETSIPLEAT 206
            L ES+P  +KRF    +EA   +G+I ANS  H  S+  +    P++ T
Sbjct: 1215 LVESNPGRSKRFSEMLKEASTAIGDIGANSTWHEMSVFSEGDEEPIDDT 1263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,787,879
Number of Sequences: 1657284
Number of extensions: 10845919
Number of successful extensions: 19902
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19900
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)