Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0425
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U71300-1|AAC50948.1| 411|Homo sapiens snRNA activating protein ... 114 3e-25
U66413-1|AAD09214.1| 411|Homo sapiens proximal sequence element... 114 3e-25
BC121012-1|AAI21013.1| 411|Homo sapiens SNAPC3 protein protein. 114 3e-25
BC121011-1|AAI21012.1| 411|Homo sapiens SNAPC3 protein protein. 114 3e-25
BC108743-1|AAI08744.1| 411|Homo sapiens small nuclear RNA activ... 114 3e-25
BC014985-1|AAH14985.1| 410|Homo sapiens small nuclear RNA activ... 114 3e-25
AL441925-2|CAI13285.1| 411|Homo sapiens small nuclear RNA activ... 114 3e-25
AL441925-3|CAI13286.1| 124|Homo sapiens small nuclear RNA activ... 61 3e-09
AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated prot... 34 0.53
AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated prot... 33 0.71
BC127252-1|AAI27253.1| 136|Homo sapiens keratin associated prot... 33 1.2
BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated prot... 33 1.2
BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated prot... 33 1.2
BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated prot... 33 1.2
BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated prot... 33 1.2
BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated prot... 33 1.2
AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated prot... 33 1.2
AJ406934-1|CAC27573.1| 136|Homo sapiens keratin associated prot... 33 1.2
BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated prot... 32 1.6
BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated prot... 32 1.6
AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated prot... 32 1.6
BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated prot... 32 2.2
BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated prot... 32 2.2
AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated prot... 32 2.2
BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated prot... 31 5.0
BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated prot... 31 5.0
AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated prot... 31 5.0
AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated prot... 31 5.0
BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated prot... 30 8.7
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 30 8.7
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 30 8.7
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 8.7
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 8.7
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 8.7
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 30 8.7
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 30 8.7
AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated prot... 30 8.7
AJ406940-1|CAC27579.1| 114|Homo sapiens keratin associated prot... 30 8.7
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 30 8.7
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 30 8.7
>U71300-1|AAC50948.1| 411|Homo sapiens snRNA activating protein
complex 50kD subunit protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>U66413-1|AAD09214.1| 411|Homo sapiens proximal sequence
element-binding transcription factor beta subunit
protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>BC121012-1|AAI21013.1| 411|Homo sapiens SNAPC3 protein protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>BC121011-1|AAI21012.1| 411|Homo sapiens SNAPC3 protein protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>BC108743-1|AAI08744.1| 411|Homo sapiens small nuclear RNA
activating complex, polypeptide 3, 50kDa protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>BC014985-1|AAH14985.1| 410|Homo sapiens small nuclear RNA
activating complex, polypeptide 3, 50kD protein.
Length = 410
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 245 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 304
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 305 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 364
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 365 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 404
>AL441925-2|CAI13285.1| 411|Homo sapiens small nuclear RNA
activating complex, polypeptiden-associated homolog
(rat)) protein.
Length = 411
Score = 114 bits (274), Expect = 3e-25
Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 246 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 305
Query: 174 GHPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWI 353
G P +Y HQG CEHV +++R V D L R YP T C C + A+W+
Sbjct: 306 GFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWV 365
Query: 354 VSGCRRVPFDPAFFCDTCFRQYLY-KDGTKIGEFKAYAYI 470
+ P DP FFCD CFR Y +G K+GEF AY Y+
Sbjct: 366 TNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYV 405
>AL441925-3|CAI13286.1| 124|Homo sapiens small nuclear RNA
activating complex, polypeptides) protein.
Length = 124
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 VFPSGFLFINNTFYVDTR-EGCVDNSAVIRTWARR--KGIGDFPVQDMCSVNLEDIVIKL 173
++ S F + TFY D R C D S I W+ +G G F M D+ IKL
Sbjct: 43 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKL 102
Query: 174 GHPEVYVHQGACEHVFTFSEVR 239
G P +Y HQG CEHV +++R
Sbjct: 103 GFPYLYCHQGDCEHVIVITDIR 124
>AJ406945-1|CAC27584.1| 193|Homo sapiens keratin associated protein
4.15 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.53
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTL-PLCPRKTCC 31
S+C P+ QS PTC CCP C R TCC
Sbjct: 31 SSCCRPQCCQSVCCQPTCCRPSCCPSCCQTTCCRTTCC 68
>AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated protein
4.4 protein.
Length = 166
Score = 33.5 bits (73), Expect = 0.71
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC +CC T C R TCC
Sbjct: 68 SSCCRPQCCQSVCCQPTCCRPQCCQTT---CCRTTCC 101
>BC127252-1|AAI27253.1| 136|Homo sapiens keratin associated protein
4-2 protein.
Length = 136
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCSPSCCQTT---CCRTTCC 76
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
R+TC P S P C CC T P C + TCC
Sbjct: 72 RTTCCRPSCCVSSCFRPQCCQSVCCQPTCCRPSCGQTTCC 111
>BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated protein
4.12 protein.
Length = 201
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 76
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 83 SSCCRPQCCQSVCCQPTCCRPSCCQTT---CCRTTCC 116
>AJ406934-1|CAC27573.1| 136|Homo sapiens keratin associated protein
4.2 protein.
Length = 136
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
S+C P+ QS PTC CC T C R TCC
Sbjct: 43 SSCCRPQCCQSVCCQPTCCSPSCCQTT---CCRTTCC 76
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
R+TC P S P C CC T P C + TCC
Sbjct: 72 RTTCCRPSCCVSSCFRPQCCQSVCCQPTCCRPSCGQTTCC 111
>BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPRCC---ISSCCRPSCCV 81
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 82 SSCCKPQCCQSMCCQPTCCRPRCC---ISSCCRPSCCV 116
>BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPRCC---ISSCCRPSCCV 81
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 82 SSCCKPQCCQSMCCQPTCCRPRCC---ISSCCRPSCCV 116
>AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated protein
4.14 protein.
Length = 195
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPRCC---ISSCCRPSCCV 81
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC RCC + C R +CC+
Sbjct: 82 SSCCKPQCCQSMCCQPTCCRPRCC---ISSCCRPSCCV 116
>BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
+ TC P Q+ P+CV CC P C + TCC
Sbjct: 21 QETCCRPSCCQTTCCCPSCVVSSCC---RPSCSQTTCC 55
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
++TC P + S P+C CC T P C R CC
Sbjct: 31 QTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCC 70
>BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
+ TC P Q+ P+CV CC P C + TCC
Sbjct: 21 QETCCRPSCCQTTCCCPSCVVSSCC---RPSCSQTTCC 55
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
++TC P + S P+C CC T P C R CC
Sbjct: 31 QTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCC 70
>AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated protein
4.10 protein.
Length = 127
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCC 31
+ TC P Q+ P+CV CC P C + TCC
Sbjct: 21 QETCCRPSCCQTTCCCPSCVVSSCC---RPSCSQTTCC 55
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
++TC P + S P+C CC T P C R CC
Sbjct: 31 QTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCC 70
>BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
S+C P+ QS PTC CC T P C +CC
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPSCCETTCCHPRCCISSCC 85
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC CC + C R +CC+
Sbjct: 92 SSCCKPQCCQSVCCQPTCCHPSCC---ISSCCRPSCCV 126
>BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
S+C P+ QS PTC CC T P C +CC
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPSCCETTCCHPRCCISSCC 85
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC CC + C R +CC+
Sbjct: 92 SSCCKPQCCQSVCCQPTCCHPSCC---ISSCCRPSCCV 126
>AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated protein
4.9 protein.
Length = 191
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCCL 28
S+C P+ QS PTC CC T C R +CC+
Sbjct: 28 SSCCRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPSCCV 67
>AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated protein
4.7 protein.
Length = 210
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
S+C P+ QS PTC CC T P C +CC
Sbjct: 47 SSCCRPQCCQSVCCQPTCCRPSCCETTCCHPRCCISSCC 85
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC CC + C R +CC+
Sbjct: 92 SSCCKPQCCQSVCCQPTCCHPSCC---ISSCCRPSCCV 126
>BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated protein
9-4 protein.
Length = 154
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 20 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCC 62
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 15 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCC 57
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 15 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCC 57
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG
seven-pass G-type receptor 1 (flamingo homolog,
Drosophila) protein.
Length = 3014
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 117 LQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
L +P+ P C RC PR P CP + CL
Sbjct: 147 LAAPTTLPAC---RCPPRPRPRCPGRPICL 173
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG
seven-pass G-type receptor 1 (flamingo homolog,
Drosophila) protein.
Length = 3014
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 117 LQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
L +P+ P C RC PR P CP + CL
Sbjct: 147 LAAPTTLPAC---RCPPRPRPRCPGRPICL 173
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG
seven-pass G-type receptor 1 (flamingo homolog,
Drosophila) protein.
Length = 3014
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 117 LQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
L +P+ P C RC PR P CP + CL
Sbjct: 147 LAAPTTLPAC---RCPPRPRPRCPGRPICL 173
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 20 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPACCQNTCC 62
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 15 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCC 57
>AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated protein
9.4 protein.
Length = 154
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 144 RSTCLGPENL----QSPSVAPTCV*LRCC-PRTLPLCPRKTCC 31
R+TC P + +P P+C CC P P C + TCC
Sbjct: 20 RTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCC 62
>AJ406940-1|CAC27579.1| 114|Homo sapiens keratin associated protein
4.8 protein.
Length = 114
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 141 STCLGPENLQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
S+C P+ QS PTC CC + C R +CC+
Sbjct: 1 SSCCKPQCCQSVCCQPTCCHPSCC---ISSCCRPSCCV 35
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 144 RSTCLGPENLQSPSVAPTCV*LRCCPRTL--PLCPRKTCC 31
R +C P+ QS PTC CC + P C +CC
Sbjct: 37 RPSCCKPQCCQSVCYQPTCCHPSCCISSCCRPYCCESSCC 76
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 117 LQSPSVAPTCV*LRCCPRTLPLCPRKTCCL 28
L +P+ P C RC PR P CP + CL
Sbjct: 147 LAAPTTLPAC---RCPPRPRPRCPGRPICL 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,627,202
Number of Sequences: 237096
Number of extensions: 1902895
Number of successful extensions: 4970
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4939
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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