Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0425
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   6.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.2  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 513 QVKKQSTYRVSDHKVPI 563
           + K  S Y VSDHK  I
Sbjct: 256 KTKPTSPYHVSDHKAAI 272


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 126 VQDMCSVNLEDIVIKLGHPEVYVHQGACEHVFTFSEV 236
           +QD+   +L  +V  + H EV VHQ +       +EV
Sbjct: 73  LQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEV 109


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 VNLEDIVIKLGHPE 185
           +N+  I  KLGHPE
Sbjct: 568 LNMSAIQFKLGHPE 581


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 585 DIIALSNLRTEKCIQ*CKWGE 647
           D+I  ++  T+K I+ C W E
Sbjct: 373 DVIERNSGATDKIIRWCTWSE 393


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 585 DIIALSNLRTEKCIQ*CKWGE 647
           D+I  ++  T+K I+ C W E
Sbjct: 373 DVIERNSGATDKIIRWCTWSE 393


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 585 DIIALSNLRTEKCIQ*CKWGE 647
           D+I  ++  T+K I+ C W E
Sbjct: 373 DVIERNSGATDKIIRWCTWSE 393


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 333  EFGAKWIVSGCRRVPFD 383
            E+G  W+  GCR+   D
Sbjct: 998  EYGKVWLFFGCRQRNLD 1014


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,894
Number of Sequences: 438
Number of extensions: 3251
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)