Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0424
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   0.93 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   0.93 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   0.93 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.5  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 222 CEITF*RSQNKGSHYIQNSISNYLRNL 142
           CE+      N+GS Y+++ I  Y+ +L
Sbjct: 166 CELVGLADLNQGSDYVRSKIIEYMNHL 192


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 222 CEITF*RSQNKGSHYIQNSISNYLRNL 142
           CE+      N+GS Y+++ I  Y+ +L
Sbjct: 167 CELVGLADLNQGSDYVRSKIIEYMNHL 193


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 222 CEITF*RSQNKGSHYIQNSISNYLRNL 142
           CE+      N+GS Y+++ I  Y+ +L
Sbjct: 167 CELVGLADLNQGSDYVRSKIIEYMNHL 193


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 316 SNYANYNFAGFIFITRCALL 257
           +NY +++ AGF  I +  LL
Sbjct: 308 NNYPDFSAAGFFSINKTTLL 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,049
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)