Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0424
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1749 - 39636951-39638102                                         29   4.1  
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    28   7.2  

>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 434 SSIVTTAAPPFKPKRITA 381
           SS+ + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +3

Query: 81   SKVKATWAAEYCIAKFRFREIDYEDNSRLNFVCNVNLCSVTFKKLSHTFRVQGTVTSR 254
            SK K+T ++EY   + + +EID     +++F CNV   +  +     +  ++G  + R
Sbjct: 2584 SKGKSTVSSEYSSIRAQLQEIDGSVLEQIDFNCNVTKKAENYPAFEVSAELEGYSSRR 2641


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,544,502
Number of Sequences: 37544
Number of extensions: 337669
Number of successful extensions: 629
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)