Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0422
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 30 1.8
SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9) 29 2.3
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_52448| Best HMM Match : X (HMM E-Value=1.7) 27 9.4
SB_1374| Best HMM Match : PAN (HMM E-Value=0.013) 27 9.4
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 27 9.4
SB_49696| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_39336| Best HMM Match : Kinesin (HMM E-Value=0) 27 9.4
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 9.4
>SB_43588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Frame = +3
Query: 405 LLAPTSLPTPTSQ----------VALLGATTYTTPFVQTVPIASTASLPVAAH 533
LL+ T+ PTPT Q + ATT T P T ++T S P+A H
Sbjct: 212 LLSHTNTPTPTPQTITAAVQTIPIVKTSATTQTPPIASTTDTSTTQSPPIALH 264
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+LLA T+ T T+ +A T T T P +TASL A
Sbjct: 392 TALLATTAPETTTASLATTAPETTTASLATTAPETTTASLATTA 435
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ LA T+ T T+ +A T T V T P +TASL A
Sbjct: 344 TASLATTAPETTTASLATTAPETTTALLVTTAPETATASLATTA 387
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 396 ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
AT+ LA T+ T T+ +A T T T P +TASL A
Sbjct: 379 ATASLATTAPETTTALLATTAPETTTASLATTAPETTTASLATTA 423
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 396 ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
AT+ LA T+ T+ +A T T T P A+TASL A
Sbjct: 626 ATASLATTAPEATTASLATTAPKTTTASLATTAPEATTASLVTTA 670
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 411 APTSLPTPTSQVALLGAT---TYTTPFVQTVPIASTASLPVAAHL 536
AP + P + ALL T T T V T P A+TASL A L
Sbjct: 574 APEATTAPETTTALLVTTAPETTTASLVTTAPEATTASLATTASL 618
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ LA T+ T T+ +A T V T P A+TASL A
Sbjct: 639 TASLATTAPKTTTASLATTAPEATTASLVTTAPEATTASLLTTA 682
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+LL T+ T T+ +A T T T P +TASL A
Sbjct: 368 TALLVTTAPETATASLATTAPETTTALLATTAPETTTASLATTA 411
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 396 ATSLLAPTSLP-TPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
AT+ T+ P T T+ +A T T V T P A+TASL A
Sbjct: 529 ATTAPETTTAPETTTASLATTAPETTTASLVTTAPEATTASLATTA 574
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 411 APTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAAHL 536
A T+ T T+ + T T V T P A+TASL A L
Sbjct: 162 ATTAPETTTASLVTTAPETTTASLVTTAPEATTASLATTASL 203
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ LA T+ T+ +A T T T P A+TASL A
Sbjct: 212 TASLATTAPEATTASLATTAPETTTASLATTAPEATTASLATTA 255
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ L T+ T T+ +A T P T P A+TASL A
Sbjct: 675 TASLLTTAPETTTASLATTAPEATTAPEATTAPEATTASLATTA 718
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ LA T+ T T+ +A T T P A+TASL A
Sbjct: 224 TASLATTAPETTTASLATTAPEATTASLATTAPEATTASLVTTA 267
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ LA T+ T T+ +A T T T P +TASL A
Sbjct: 404 TASLATTAPETTTASLATTAPETTTASLATTAPETTTASLLTTA 447
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
T+ APT+ PT+ AL TT T P T P +TA A
Sbjct: 19 TTATAPTTTTAPTTNTAL---TTTTAPTTTTAPTTTTAPTTTTA 59
>SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9)
Length = 930
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 405 LLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
+ +PTS+ + S ++L G+T TP V T+ +T S P++A
Sbjct: 88 VFSPTSVASVCSGLSLAGSTPLMTPLVSTLSTPATTS-PLSA 128
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 269 TTYHGKTPLLASTSYVSSIP 328
T YHG TP ST Y SIP
Sbjct: 387 TPYHGSTPYRGSTPYRGSIP 406
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 384 NGP*ATSLLAPTSLPTPTSQVALLGATTYT-TPFVQTVPIASTAS 515
+ P AT APT+ TPT+ A TT T T + +P ++AS
Sbjct: 432 SAPTATLTSAPTATVTPTASNAFTETTTVTSTTTITVLPQPTSAS 476
>SB_52448| Best HMM Match : X (HMM E-Value=1.7)
Length = 549
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 405 LLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
+ + TSL + S ++L G+T TP V T+ +T S P++A
Sbjct: 48 VFSSTSLASVCSGLSLAGSTPLMTPLVSTLSTLATTS-PLSA 88
>SB_1374| Best HMM Match : PAN (HMM E-Value=0.013)
Length = 498
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 144 CIPHPWSTLHRMATLISSRRGLLHMLRISLLHHTLLFLPS*QPPTTVKLLSWL 302
CI W LH LI+S RGL ++ + +H F+P T+ + LS++
Sbjct: 403 CIHMTWVMLH--IGLITSSRGLSYITSTRMCNHMTRFMPHIGLITSSRGLSYI 453
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 153 EGCTTLLASL--LIVVDPGETTVVRDVTGGVKKTPGSAAATA-NKAHTINL 10
EG LL++L ++ VDP TV DVT G+ G + TA N+ +NL
Sbjct: 147 EGMYDLLSTLPGVLPVDPSTMTVSEDVT-GLTHVKGLSVHTAINEEEALNL 196
>SB_49696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 399 TSLLAPTSLPTPTSQVALLGATTYTTPF 482
TSLL S P P S + +L YT PF
Sbjct: 145 TSLLGTKSHPKPISAIPVLITNKYTNPF 172
>SB_39336| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 558
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 153 EGCTTLLASL--LIVVDPGETTVVRDVTGGVKKTPGSAAATA-NKAHTINL 10
EG LL++L ++ VDP TV DVT G+ G + TA N+ +NL
Sbjct: 147 EGMYDLLSTLPGVLPVDPSTMTVSEDVT-GLTHVKGLSVHTAINEEEALNL 196
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 547 LFLIR*AATGSDAVDAIGTVCTKGXXXXVAPKRATCDVGVGSDV-GAKSD 401
+ ++R + G DAIG V G A R + D GVG D G SD
Sbjct: 27 MLMVRDSDDGGVGDDAIGRVSDDGGVGDDADGRVSDDGGVGDDADGRVSD 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,539,937
Number of Sequences: 59808
Number of extensions: 371487
Number of successful extensions: 1289
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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