Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0422
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-6|CAH60781.2|  401|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC024776-1|AAK68468.1|  338|Caenorhabditis elegans Hypothetical ...    29   2.7  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    28   6.3  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    28   6.3  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z70682-6|CAH60781.2|  401|Caenorhabditis elegans Hypothetical
           protein F08G5.7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 399 TSLLAPTSLPTPTSQVALLGATT--YTTPFVQTVPIASTASLPV 524
           T+  APT+  T TS       TT   TT  + T P ++TAS+P+
Sbjct: 234 TTTKAPTTTKTSTSTTTPKFTTTTIQTTKKITTSPTSTTASIPI 277


>AC024776-1|AAK68468.1|  338|Caenorhabditis elegans Hypothetical
           protein Y41D4B.18 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 396 ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLPVAA 530
           A S  A TS P PT+     GA T +T    T     T+S PV++
Sbjct: 236 APSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSS 280


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 362 FIKKRSPQWPVSYIALSSYITPN-TYIASGPLGSHYLHDTLRADRADRID-CITSRRSSS 535
           F+    PQ     + +   I  N TY   GP     L D ++ D +D  D C +SRR + 
Sbjct: 505 FLDTVCPQAAAPEVVIKEKIINNDTYTLMGPADWGKLEDIVKDDYSDSGDSCYSSRRGTG 564

Query: 536 DQ 541
            Q
Sbjct: 565 SQ 566


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 362 FIKKRSPQWPVSYIALSSYITPN-TYIASGPLGSHYLHDTLRADRADRID-CITSRRSSS 535
           F+    PQ     + +   I  N TY   GP     L D ++ D +D  D C +SRR + 
Sbjct: 505 FLDTVCPQAAAPEVVIKEKIINNDTYTLMGPADWGKLEDIVKDDYSDSGDSCYSSRRGTG 564

Query: 536 DQ 541
            Q
Sbjct: 565 SQ 566


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 390 P*ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLP 521
           P     + P +  TPT+  +    TT TT   QT P     + P
Sbjct: 672 PTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTP 715


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 390 P*ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLP 521
           P     + P +  TPT+  +    TT TT   QT P     + P
Sbjct: 728 PTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTP 771


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 390 P*ATSLLAPTSLPTPTSQVALLGATTYTTPFVQTVPIASTASLP 521
           P     + P +  TPT+  +    TT TT   QT P     + P
Sbjct: 551 PTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTP 594


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,472
Number of Sequences: 27780
Number of extensions: 261704
Number of successful extensions: 1008
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)