SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0421
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.6  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   6.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.0  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 730 GPFLSCELTSVPASNSSMTNCYVISTCSQMKRCVSQVCLY 611
           GP+LS  +    A +     CY ++ CS   R  S+V +Y
Sbjct: 123 GPYLSSYVLMATAIDRHQAICYPLTYCSWTSR-RSKVMVY 161


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 394  KHRYGGTVCASRNHKLRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHL 546
            K+ YG     +RNH+   A+S    ++ E      A    + +H+R+ L +
Sbjct: 1493 KNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQM 1543


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 394  KHRYGGTVCASRNHKLRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHL 546
            K+ YG     +RNH+   A+S    ++ E      A    + +H+R+ L +
Sbjct: 1493 KNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQM 1543


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 394  KHRYGGTVCASRNHKLRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHL 546
            K+ YG     +RNH+   A+S    ++ E      A    + +H+R+ L +
Sbjct: 1493 KNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQM 1543


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 394  KHRYGGTVCASRNHKLRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHL 546
            K+ YG     +RNH+   A+S    ++ E      A    + +H+R+ L +
Sbjct: 1493 KNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQM 1543


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 371 QKQDTAVLSIDTVEQFAHPGITSCGSRLPRITQNSLNDY 487
           +K +T  +  D  E+F HP +   GS   +   N + D+
Sbjct: 319 RKNETPGMPND-FEEFVHPTVAKRGSITSKNVANKIRDF 356


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 421 RKLFHRIYA*DGSVLLLWSI 362
           R LFHR ++  G++L+ W++
Sbjct: 212 RGLFHRGWSMSGTMLVPWAL 231


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 421 RKLFHRIYA*DGSVLLLWSI 362
           R LFHR ++  G++L+ W++
Sbjct: 212 RGLFHRGWSMSGTMLVPWAL 231


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 421 RKLFHRIYA*DGSVLLLWSI 362
           R LFHR ++  G++L+ W++
Sbjct: 212 RGLFHRGWSMSGTMLVPWAL 231


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 421 RKLFHRIYA*DGSVLLLWSI 362
           R LFHR ++  G++L+ W++
Sbjct: 212 RGLFHRGWSMSGTMLVPWAL 231


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 421 RKLFHRIYA*DGSVLLLWSI 362
           R LFHR ++  G++L+ W++
Sbjct: 212 RGLFHRGWSMSGTMLVPWAL 231


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 621 CVFIVRVSTVTQKYSHYID 565
           C F+V VS    KY++  D
Sbjct: 10  CAFLVAVSAAENKYTNKYD 28


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 653 MQPNEEVCFPSVSLLLGLAP 594
           +QP+   C PSV L  G+ P
Sbjct: 43  VQPDPGSCDPSVGLRQGIPP 62


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 550 LLNAMGFFCAHLNN*DPLQLLIIVQRVLCYSWKPRTATCDSWMR 419
           +L +M  F    N  D   LL  ++ +  YS KP+    + W+R
Sbjct: 121 MLTSMVMFYKRSN--DLKTLLSNLESIQIYSIKPKERNSNHWVR 162


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -2

Query: 172 YTRSSHFYVIRLINVHCTLTKIS 104
           Y  +++ ++I +IN++C L  I+
Sbjct: 157 YHTTAYLHIITMINMNCALWYIN 179


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -2

Query: 172 YTRSSHFYVIRLINVHCTLTKIS 104
           Y  +++ ++I +IN++C L  I+
Sbjct: 157 YHTTAYLHIITMINMNCALWYIN 179


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 550 LLNAMGFFCAHLNN*DPLQLLIIVQRVLCYSWKPRTATCDSWMR 419
           +L +M  F    N  D   LL  ++ +  YS KP+    + W+R
Sbjct: 77  MLTSMVMFYKRSN--DLKTLLSNLESIQIYSIKPKERNSNHWVR 118


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -2

Query: 172 YTRSSHFYVIRLINVHCTLTKIS 104
           Y  +++ ++I +IN++C L  I+
Sbjct: 157 YHTTAYLHIITMINMNCALWYIN 179


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = +1

Query: 247 DHSKCVLEFNLPAIPITQSGQPMPVEFLDEPHDH 348
           ++ KC L FN+      +  +P P +     H +
Sbjct: 80  EYEKCDLPFNIDCTSRPKLQEPQPSQHCPRKHGY 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,665
Number of Sequences: 336
Number of extensions: 4401
Number of successful extensions: 24
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -