Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0421
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          39   2e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.4  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    24   5.8  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    24   5.8  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   7.6  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   7.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +1

Query: 439 LRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHLAACRGYVDVVRILLRHG 597
           L  A S N+  +V+ LL AGA  +  D    +PLH A      D+VR+LL  G
Sbjct: 788 LHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 229 SDNPVFDHSKCVLEFNLPAIPITQSGQPMPV 321
           S +PV D S+ V    +P++P+  S +P PV
Sbjct: 350 SISPVSDRSESVSP--VPSLPVRSSPEPSPV 378


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -2

Query: 733 CGPFLSCELTSVPASNSSMTNCYVISTCSQMKRCVSQVC 617
           C P     ++S+  S S++ N Y ++TC       +  C
Sbjct: 94  CDPKQVTVVSSISRSRSTVVNSYNLTTCPSWAHAPNGPC 132


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -2

Query: 733 CGPFLSCELTSVPASNSSMTNCYVISTCSQMKRCVSQVC 617
           C P     ++S+  S S++ N Y ++TC       +  C
Sbjct: 94  CDPKQVTVVSSISRSRSTVVNSYNLTTCPSWAHAPNGPC 132


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -2

Query: 652 CSQMKRCVSQVCLYC*G*HRDAEVFSLHR 566
           C     C    C++C     D EV+  HR
Sbjct: 145 CRNKSTCELDHCVFCFNNKADREVYESHR 173


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -2

Query: 652 CSQMKRCVSQVCLYC*G*HRDAEVFSLHR 566
           C     C    C++C     D EV+  HR
Sbjct: 146 CRNKSTCELDHCVFCFNNKADREVYESHR 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,621
Number of Sequences: 2352
Number of extensions: 18074
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)