Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0418
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   6.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   6.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 13  GYTKIGTIQRRLAWPLRKDDTQ 78
           GY +I  +Q+   W +  DDTQ
Sbjct: 298 GYNEIVELQKEGGWKVVWDDTQ 319


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 50  HGPCARMTRKIVKRSTFLYVYTTELFPTVARNM 148
           HGP  R+    V  S      + ++FP VAR M
Sbjct: 156 HGPITRVIDSKVVDSRKNTTVSIDVFPAVARWM 188


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 273 IPST-GNSPNTMGGSQEASTFSSPKNGAN 190
           I ST GN+ NT   +   + F++  NGA+
Sbjct: 121 ISSTRGNNNNTPSATNNNTNFNNNSNGAS 149


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 273 IPST-GNSPNTMGGSQEASTFSSPKNGAN 190
           I ST GN+ NT   +   + F++  NGA+
Sbjct: 69  ISSTRGNNNNTPSATNNNTNFNNNSNGAS 97


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 273 IPST-GNSPNTMGGSQEASTFSSPKNGAN 190
           I ST GN+ NT   +   + F++  NGA+
Sbjct: 252 ISSTRGNNNNTPSATNNNTNFNNNSNGAS 280


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 665 DLNFKSTQKSSNSSLHSIKQSRFL 594
           D+NF+    +  S+ HS+ QS+ +
Sbjct: 460 DVNFQEENLALTSTEHSLSQSQHI 483


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 665 DLNFKSTQKSSNSSLHSIKQSRFL 594
           D+NF+    +  S+ HS+ QS+ +
Sbjct: 285 DVNFQEENLALTSTEHSLSQSQHI 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,707
Number of Sequences: 336
Number of extensions: 4410
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)