Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0418
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   1.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.3  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.1  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   3.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.1  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   9.4  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 317 LAVSLSSLEGNSRPRFLVLETVRIQWVVARKPVHL 213
           LAV +   E N RP    ++TV  +W      ++L
Sbjct: 330 LAVRIQRQENNIRPMVKQIDTVAAEWPATTNYLYL 364


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -1

Query: 483 HPLNSG-----EINNKLQFPKRSKGGSLV*YTRKYV 391
           HP+ +G        N L FP+R  G ++  + +KYV
Sbjct: 288 HPIPTGYYPTMRFRNGLAFPQRETGATVPLHMQKYV 323


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -1

Query: 483 HPLNSG-----EINNKLQFPKRSKGGSLV*YTRKYV 391
           HP+ +G        N L FP+R  G ++  + +KYV
Sbjct: 288 HPIPTGYYPTMRFRNGLAFPQRETGATVPLHMQKYV 323


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 337 LIYLRSPLRLTNLYISVTNIFSCIL 411
           LI   SP+   N++I ++ IF C +
Sbjct: 100 LIVECSPISDANVHIKISKIFQCFM 124


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 367 TNLYISVTNIFSCI 408
           TN+++ +T IF CI
Sbjct: 110 TNVHLKITKIFQCI 123


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -1

Query: 480 PLNSG-----EINNKLQFPKRSKGGSLV*YTRKYV 391
           P+NSG       +N + FP+R++  SL  Y  KY+
Sbjct: 292 PINSGFYSTIMYSNGVTFPQRNRFSSLPYYKYKYL 326


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -1

Query: 480 PLNSG-----EINNKLQFPKRSKGGSLV*YTRKYV 391
           P+NSG       +N + FP+R++  SL  Y  KY+
Sbjct: 292 PINSGFYSTIMYSNGVTFPQRNRFSSLPYYKYKYL 326


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 286 IAGHDS*YWKQSE 248
           IAGHD   W +SE
Sbjct: 22  IAGHDGNLWAKSE 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,086
Number of Sequences: 438
Number of extensions: 4852
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)