Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0418
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20660.1 68416.m02615 organic cation transporter family prote... 59 3e-09
At3g13050.1 68416.m01626 transporter-related low similarity to a... 46 3e-05
At1g73220.1 68414.m08474 sugar transporter family protein contai... 44 8e-05
At1g79360.1 68414.m09248 transporter-related low similarity to S... 42 4e-04
At1g79410.1 68414.m09254 transporter-related low similarity to o... 39 0.003
At1g16390.1 68414.m01960 organic cation transporter-related low ... 38 0.005
At5g43340.1 68418.m05298 inorganic phosphate transporter identic... 38 0.007
At1g16370.1 68414.m01958 transporter-related low similarity to o... 34 0.088
At3g18830.1 68416.m02391 mannitol transporter, putative similar ... 34 0.12
At5g26250.1 68418.m03131 sugar transporter, putative similar to ... 33 0.15
At3g54700.1 68416.m06052 phosphate transporter, putative strong ... 33 0.20
At2g38940.1 68415.m04785 phosphate transporter (PT2) identical t... 33 0.27
At5g18840.1 68418.m02239 sugar transporter, putative similar to ... 32 0.47
At4g04750.1 68417.m00697 sugar transporter family protein simila... 31 1.1
At3g05960.1 68416.m00680 sugar transporter, putative similar to ... 30 1.4
At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3) ... 30 1.9
At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1) ... 29 2.5
At2g21720.1 68415.m02584 hypothetical protein contains Pfam prof... 29 3.3
At4g04760.1 68417.m00698 sugar transporter family protein simila... 29 4.4
At5g22780.1 68418.m02663 adaptin family protein similar to SP|P1... 28 5.8
At4g36670.1 68417.m05203 mannitol transporter, putative similar ... 28 5.8
At2g32830.1 68415.m04019 inorganic phosphate transporter (PHT5) ... 28 5.8
At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containi... 28 5.8
At5g22770.3 68418.m02661 adaptin family protein similar to SP|P1... 28 7.7
At5g22770.2 68418.m02660 adaptin family protein similar to SP|P1... 28 7.7
At5g22770.1 68418.m02659 adaptin family protein similar to SP|P1... 28 7.7
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 28 7.7
At3g07970.1 68416.m00974 polygalacturonase, putative / pectinase... 28 7.7
>At3g20660.1 68416.m02615 organic cation transporter family protein
similar to organic cation transporter OCT3 [Rattus
norvegicus] GI:3273722, organic cation transporter 3
[Mus musculus] GI:4454795; contains Pfam profile
PF00083: major facilitator superfamily protein
Length = 534
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +2
Query: 101 LYVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIVA 280
L++Y ELFPTV RN A+G ++ + G++LAPF + VL LP FG+F V G+V
Sbjct: 443 LFIYIAELFPTVVRNAALGCATQAAQMGAILAPF---VVVLGEELP---FGVFAVCGLVG 496
Query: 281 ---CYFLPETKGKQLDD 322
++LPET K L D
Sbjct: 497 GGLAFYLPETLNKPLYD 513
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +2
Query: 95 TFLYVYTTELFPTVARNMAMGASSTTTRAGSMLAPF--FGELNVLASWLPPIVFG-LFPV 265
T +Y+Y E++PT R +G S+ R G +L P G ++ + ++F + V
Sbjct: 409 TVVYIYAPEIYPTAVRTTGVGVGSSVGRIGGILCPLVAVGLVHGCHQTIAVLLFEVVILV 468
Query: 266 LGIVACYFLPETKGKQLDDHLDES 337
GI C F ET G+ L D + S
Sbjct: 469 SGICVCLFPFETSGRDLTDSISAS 492
>At1g73220.1 68414.m08474 sugar transporter family protein contains
Pfam profile: PF00083 sugar (and other) transporter
Length = 539
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +2
Query: 101 LYVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIVA 280
LYVY ELFPT RN A+ G+ AP L ++ + IVFG+ VL +
Sbjct: 447 LYVYCVELFPTNVRNTAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIV 506
Query: 281 CYFLPETKGKQLDDHL 328
+L ET+ L + L
Sbjct: 507 SLWLRETRNAPLYETL 522
>At1g79360.1 68414.m09248 transporter-related low similarity to
SP|O76082 Organic cation/carnitine transporter 2 (Solute
carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) {Homo
sapiens}; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 527
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 107 VYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGL-FPVLGIVAC 283
+YT ELFPT RN A+ + G + +P ++ +FGL +LG+ A
Sbjct: 435 IYTIELFPTCVRNSAIAMARQALVLGGVFSPIMVAAGRKNAFWSFGLFGLAIGLLGLFA- 493
Query: 284 YFLPETKGKQLDDHLDE 334
LPET+G L D +DE
Sbjct: 494 VGLPETRGSDLCDTMDE 510
>At1g79410.1 68414.m09254 transporter-related low similarity to
organic anion transporter 3 [Rattus norvegicus]
GI:5545293; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 515
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 107 VYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGL-FPVLGIVAC 283
+Y ELFPT RN A G P L L VFG LG+ A
Sbjct: 426 IYLVELFPTCVRNSATMMLRQALVVGGACCPLIASLGRNVPSLSFAVFGFAMSGLGLFAL 485
Query: 284 YFLPETKGKQLDDHLDE 334
LPETKG L D ++E
Sbjct: 486 -LLPETKGLSLCDTMEE 501
>At1g16390.1 68414.m01960 organic cation transporter-related low
similarity to Organic cation/carnitine transporter 2
(Solute carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) from {Homo
sapiens} SP|O76082, {Rattus norvegicus} SP|O70594;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 518
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 107 VYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIVACY 286
+YT E+FPT RN A+ G + +P + +FGL L + +
Sbjct: 430 IYTIEMFPTCVRNSAISMVRQALVFGGVFSPVMVAAGRENQFWSYGLFGLIIGLCGLFVF 489
Query: 287 FLPETKGKQLDDHLDE 334
LPET+G L D +DE
Sbjct: 490 GLPETRGSVLCDTMDE 505
>At5g43340.1 68418.m05298 inorganic phosphate transporter identical
to inorganic phosphate transporter [Arabidopsis
thaliana] GI:3869190
Length = 516
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGL--FPVLGIV 277
++ E+FP R+ G S+ + +AG+M+ F V A + ++ + +LG++
Sbjct: 426 FIVPAEIFPARIRSTCHGISAASGKAGAMVGSFGFSALVKALGMSNTLYIMAGINLLGLL 485
Query: 278 ACYFLPETKGKQLDD 322
+ +PET GK L++
Sbjct: 486 LTFTIPETNGKSLEE 500
>At1g16370.1 68414.m01958 transporter-related low similarity to
organic cation transporter OCTN1 from [Homo sapiens]
GI:2605501, [Mus musculus] GI:4126605, [Rattus
norvegicus] GI:5679326; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 521
Score = 34.3 bits (75), Expect = 0.088
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 107 VYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPV----LGI 274
V+ E+FPT R+ A G P + ++P + F +F + LG+
Sbjct: 432 VFMVEMFPTCVRSSATMMFRQALVVGGACCPLIASIG---RYIPSVSFAIFGIAMSGLGM 488
Query: 275 VACYFLPETKGKQLDDHLDE 334
LPETKG L D ++E
Sbjct: 489 FVL-ILPETKGLSLCDSMEE 507
>At3g18830.1 68416.m02391 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 539
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 104 YVYTTELFPTVARNM--AMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIV 277
+VY++E+FP R+ +MG +G + F + + +FG + V
Sbjct: 418 WVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWV 477
Query: 278 ACY-FLPETKGKQLDDHLDE 334
Y FLPET+G+ L+D +DE
Sbjct: 478 FFYTFLPETQGRMLED-MDE 496
>At5g26250.1 68418.m03131 sugar transporter, putative similar to
hexose transporter [Lycopersicon esculentum] GI:5734440,
sugar carrier protein {Ricinus communis} SP|Q41144,
monosaccharide transporter [Nicotiana tabacum] GI:19885;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 507
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 104 YVYTTELFPTVARN--MAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIV 277
++ +E FP R A+ S + F L + S + G V+G+
Sbjct: 404 WLIPSETFPLETRTEGFALAVSCNMFFTFVIAQAFLSMLCAMKSGIFFFFSGWIVVMGLF 463
Query: 278 ACYFLPETKGKQLDDHLD 331
A +F+PETKG +DD D
Sbjct: 464 ALFFVPETKGVSIDDMRD 481
>At3g54700.1 68416.m06052 phosphate transporter, putative strong
similarity to phosphate transporter (AtPT2) [Arabidopsis
thaliana] GI:1502430
Length = 433
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLAS--------WLPP------ 241
+V E+FP R+ G S+ + + G+M+ F G L + S PP
Sbjct: 320 FVVPAEIFPARFRSTCHGISAASGKLGAMVGAF-GFLYLAQSPDKTKTEHGYPPGIGVKN 378
Query: 242 --IVFGLFPVLGIVACYFLPETKGKQLDDHLDES 337
IV G+ +LG+V +PE+KGK L++ E+
Sbjct: 379 SLIVLGVVNLLGMVFTLLVPESKGKSLEEMSGEN 412
>At2g38940.1 68415.m04785 phosphate transporter (PT2) identical to
phosphate transporter (AtPT2) [Arabidopsis thaliana]
GI:1502430
Length = 534
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFF-------GELNVLASWLPP------- 241
+V E+FP R+ G S+ + + G+M+ F + + + PP
Sbjct: 426 FVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNS 485
Query: 242 -IVFGLFPVLGIVACYFLPETKGKQLDDHLDES 337
IV G+ LGI+ + +PE+KGK L++ E+
Sbjct: 486 LIVLGVVNFLGILFTFLVPESKGKSLEEMSGEN 518
>At5g18840.1 68418.m02239 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family protein 1 [Arabidopsis thaliana]
GI:14585699; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 482
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIVAC 283
+V +E+FP + +A +G+ + N L SW P F L+
Sbjct: 399 WVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSY--TFNFLMSWSSPGTFYLYSAFAAATI 456
Query: 284 YFL----PETKGKQLDD 322
F+ PETKGK L++
Sbjct: 457 IFVAKMVPETKGKTLEE 473
>At4g04750.1 68417.m00697 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 461
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPV---LGI 274
++ +E++P + A + T S L + N L W F +F LG
Sbjct: 371 WIIASEIYPVDVKGAAGTVCNLVTSISSWLVTY--SFNFLLQWSSTGTFMMFATVMGLGF 428
Query: 275 V-ACYFLPETKGKQLDD 322
V +PETKGK L++
Sbjct: 429 VFTAKLVPETKGKSLEE 445
>At3g05960.1 68416.m00680 sugar transporter, putative similar to
hexose transporter GI:5734440 GB:CAB52689 [Lycopersicon
esculentum], Sugar carrier protein C [Ricinus communis]
SP|Q41144, monosaccharide transporter [Nicotiana
tabacum] GI:19885; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 507
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 251 GLFPVLGIVACYFLPETKGKQLDD 322
G V+G+ A +F+PETKG +DD
Sbjct: 454 GWIIVMGLFAFFFIPETKGIAIDD 477
>At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780347
Length = 521
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFF-------GELNVLASWLPP------- 241
++ E+FP R+ G S+ T +AG+++ F + + PP
Sbjct: 425 FIVPAEIFPARLRSTCHGISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNS 484
Query: 242 -IVFGLFPVLGIVACYFLPETKGKQLDD 322
I+ G+ +G++ + +PE KGK L++
Sbjct: 485 LIMLGVINFVGMLFTFLVPEPKGKSLEE 512
>At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1)
(PT1) identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2258116
Length = 524
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASW--------LPP------ 241
++ E+FP R+ G S+ +AG+++ F G L S PP
Sbjct: 425 FIVPAEIFPARLRSTCHGISAAAGKAGAIVGAF-GFLYAAQSQDKAKVDAGYPPGIGVKN 483
Query: 242 --IVFGLFPVLGIVACYFLPETKGKQLDD 322
I+ G+ +G++ + +PE KGK L++
Sbjct: 484 SLIMLGVLNFIGMLFTFLVPEPKGKSLEE 512
>At2g21720.1 68415.m02584 hypothetical protein contains Pfam
profile: PF04842 plant protein of unknown function
(DUF639)
Length = 703
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 170 TTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIVACYFLPETKGKQLDD 322
T++A + + VLAS+ + F LF + GIV C+ + + G + +
Sbjct: 626 TSKASKHASMVMALMLVLASFFAVVPFKLFIIFGIVYCFVMTSSVGTYMSN 676
>At4g04760.1 68417.m00698 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 467
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 107 VYTTELFPTVARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVFGLFPVLGIV-AC 283
VY TE+ P RN+ ASS + F L + +W + G P L ++
Sbjct: 136 VYITEIAP---RNLRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMVLPLL 192
Query: 284 YFLPET 301
+F+PE+
Sbjct: 193 FFIPES 198
>At5g22780.1 68418.m02663 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1013
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 270 PSTGNSPNTMGGSQEASTFSSPKNGANIEPARVVVDEAPMAIFRATVGNSSVVYTYK 100
P +PN + S +TF S GA + AR+ D A R TVG+ T++
Sbjct: 909 PGLDPNPNNLVAS---TTFYSETTGAMLCLARIETDPADRTQLRLTVGSGDPTLTFE 962
>At4g36670.1 68417.m05203 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 493
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 104 YVYTTELFPTV--ARNMAMGASSTTTRAGSMLAPFFGELNVLASWLPPIVF-GLFPVLGI 274
+VY++E+FP A+ ++G + ++ F + + + +F G+ V
Sbjct: 399 WVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWN 458
Query: 275 VACYFLPETKGKQLDD 322
+ LPETKGK L++
Sbjct: 459 FFFFLLPETKGKSLEE 474
>At2g32830.1 68415.m04019 inorganic phosphate transporter (PHT5)
identical to inorganic phosphate transporter (PHT5)
[Arabidopsis thaliana] GI:2780345
Length = 542
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Frame = +2
Query: 104 YVYTTELFPTVARNMAMGASSTTTRAGSMLAPF-------FGELNVLASWLPP------- 241
+V E+FP R+ G S+ + +AG+++ F + + PP
Sbjct: 427 FVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNS 486
Query: 242 -IVFGLFPVLGIVACYFLPETKGKQLDD 322
++ LGIV +PE+KGK L++
Sbjct: 487 LLMLACVNFLGIVFTLLVPESKGKSLEE 514
>At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 537
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 58 LRKDDTQNREAFHIFIRVHYRAVPNGGSE 144
L +DTQ E FH I+ HYR P ++
Sbjct: 57 LTPEDTQTVEKFHSIIKDHYRKNPTSPND 85
>At5g22770.3 68418.m02661 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 270 PSTGNSPNTMGGSQEASTFSSPKNGANIEPARVVVDEAPMAIFRATVGNSSVVYTYK 100
P +PN + S +TF S GA + AR+ D A R TVG T++
Sbjct: 909 PGLDPNPNNLVAS---TTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFE 962
>At5g22770.2 68418.m02660 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 270 PSTGNSPNTMGGSQEASTFSSPKNGANIEPARVVVDEAPMAIFRATVGNSSVVYTYK 100
P +PN + S +TF S GA + AR+ D A R TVG T++
Sbjct: 909 PGLDPNPNNLVAS---TTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFE 962
>At5g22770.1 68418.m02659 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 270 PSTGNSPNTMGGSQEASTFSSPKNGANIEPARVVVDEAPMAIFRATVGNSSVVYTYK 100
P +PN + S +TF S GA + AR+ D A R TVG T++
Sbjct: 909 PGLDPNPNNLVAS---TTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFE 962
>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) identical
to peroxisomal ABC transporter PXA1 GI:15320529 from
[Arabidopsis thaliana]; contains Pfam profile PF00005:
ABC transporter;
Length = 1337
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 10 RGYTKIGTIQRRLAWPLRKDDTQNREA 90
R YT +GT++ ++ +PL K++ + R A
Sbjct: 1176 RPYTCLGTLRDQIIYPLSKEEAEKRAA 1202
>At3g07970.1 68416.m00974 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase precursor [Cucumis
melo] GI:3320462; contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases); contains non-consensus
AA donor splice site at exon 2
Length = 439
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -1
Query: 261 GNSPNTMGGSQEASTFSSPKNGANIEPARVVVDEAPMAIFRATVGNSSVVYTYKNVERFT 82
G +P + S +TF + NG + +A M + A ++ +VY R
Sbjct: 61 GYAPRSSPRSFNVNTFGAKANGNDDS-------KAFMKAWEAACSSTGIVYIVAPKNRDY 113
Query: 81 ILRVILAQGPC*SSL 37
+L+ + GPC SSL
Sbjct: 114 MLKAVTFSGPCKSSL 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,363,311
Number of Sequences: 28952
Number of extensions: 346296
Number of successful extensions: 862
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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