Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0415
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   126   9e-30
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    83   2e-16
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    56   3e-08
AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical ...    29   2.5  
U40959-5|AAA81769.1|  531|Caenorhabditis elegans Udp-glucuronosy...    28   4.4  
Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  126 bits (305), Expect = 9e-30
 Identities = 62/93 (66%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   IIKKKLVRKVLDMLKKIPDDEYEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHSEE 180
           +IKKKLVRKVLDMLKK+   +++ FW E+STNIKLGVMEDPSNR RLAKLLRF SS+  +
Sbjct: 437 VIKKKLVRKVLDMLKKLDGAQFDDFWSEFSTNIKLGVMEDPSNRMRLAKLLRFQSSNDAD 496

Query: 181 K-TFLSDYVKRMKPKQHHIYYIAGSSRAEVSVA 276
           K T L+ YV+RMK KQ  IYY+AG+SR EV  +
Sbjct: 497 KTTTLAAYVERMKEKQDAIYYMAGTSRKEVETS 529



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 31/51 (60%), Positives = 43/51 (84%)
 Frame = +2

Query: 437 RLQVEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAQGNI 589
           R +VE SPF ERL+++GYEVL+LTEAVDEYC+ ++PEY+  KFQN+A+  +
Sbjct: 523 RKEVETSPFVERLIAKGYEVLFLTEAVDEYCIQAMPEYESKKFQNVAKEGV 573


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 35/94 (37%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   IIKKKLVRKVLDMLKKIPDDE--YEHFWKEYSTNIKLGVMEDPSNRSRLAKLLRFHSSHS 174
           +I+K LV+K ++++ ++ +D+  ++ F++++  N+KLG+ ED +NR +L+  LR+ +S  
Sbjct: 382 VIRKNLVKKCMELIDEVAEDKDNFKKFYEQFGKNLKLGIHEDSTNRKKLSDFLRYSTSAG 441

Query: 175 EEKTFLSDYVKRMKPKQHHIYYIAGSSRAEVSVA 276
           +E T L +YV RMK  Q  IYYI G S+  V+ +
Sbjct: 442 DEPTSLKEYVSRMKENQTQIYYITGESKDVVAAS 475



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = +2

Query: 446 VEKSPFAERLVSRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAQ 580
           V  S F ER+ SRG+EVLY+ + +DEYC+  L EYDG K  ++ +
Sbjct: 472 VAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTK 516


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1   IIKKKLVRKVLDMLKKIPDDEYEHFWKEYSTNIKLGVM--EDPSNRSRLAKLLRFHSSHS 174
           II  K++  +   +KK P  +Y  F+K YS   K GV+  +D   +  +AKLL F SS  
Sbjct: 380 IITDKILGSLQSEMKKDPV-KYSEFFKNYSLYFKEGVVTEQDQGVKEDVAKLLLFESSSK 438

Query: 175 E--EKTFLSDYVKRMKPKQHHIYYIAGSSR 258
           +  E T L DYVKRM+  Q  IYY+  ++R
Sbjct: 439 KAGELTSLGDYVKRMQEGQKEIYYMYANNR 468


>AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.6 protein.
          Length = 446

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 64  YEHFWKEYSTNIKLGVMEDPSNRSRLAKLL 153
           +E FWK Y   I++  ME+  N+S L++ L
Sbjct: 331 HETFWKRYFYAIEVAEMEEEMNKSTLSEAL 360


>U40959-5|AAA81769.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein46 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
 Frame = +1

Query: 4   IKKKLVRKVLDMLKKIPD-------DEYEHFWKEYSTNIKLGVMED 120
           I  K++R VLD++KK PD       D+Y+   +EY+ ++    + D
Sbjct: 308 IDSKVMRTVLDIVKKFPDYHFVIRADKYDLSTREYAKSVSNAFVSD 353


>Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical
           protein T18D3.1 protein.
          Length = 523

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -2

Query: 437 GGSVSTRGKHSSEHF*HQQDV-KCENKNICICSSFQRISEGATVRRFIMNGH 285
           GG +  RG    EH  H   +      N  I S F+R+    T   F +NG+
Sbjct: 120 GGILDVRGSRRREHHHHVVSLYDLRYPNDPITSYFKRLKSSVTSMEFYLNGN 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,016,479
Number of Sequences: 27780
Number of extensions: 269138
Number of successful extensions: 972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)