Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0414
         (326 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   0.92 
UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_Q59NG7 Cluster: Potential nuclear pore complex subunit;...    32   2.1  
UniRef50_P32487 Cluster: Lysine-specific permease; n=31; Sacchar...    31   6.5  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    30   8.6  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 285 RGGARYPIRPIVSR 326
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 353

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 263 QKKKKKNSRGGPVPNS 310
           +KKKKKNSRGGPVP +
Sbjct: 45  KKKKKKNSRGGPVPGN 60


>UniRef50_Q59NG7 Cluster: Potential nuclear pore complex subunit;
           n=1; Candida albicans|Rep: Potential nuclear pore
           complex subunit - Candida albicans (Yeast)
          Length = 662

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = -3

Query: 144 LLKFYIYIAFLLIFHTL*LQSTINFNN*TSCTWSSDILLARLQAFICL 1
           L+K+YIY +F+LI     L S I  NN TS  W + + L+ L  FI L
Sbjct: 231 LVKYYIYKSFILIILIFRLDSDIIPNNNTS--WITYLQLSYLSFFIIL 276


>UniRef50_P32487 Cluster: Lysine-specific permease; n=31;
           Saccharomycetales|Rep: Lysine-specific permease -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 611

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 95  YNFNPQLISIIELVVLGQVIFYWPDCKPL 9
           Y FN  +   +E+ V+GQVI YW D  PL
Sbjct: 195 YWFNWAITYAVEVSVIGQVIEYWTDKVPL 223


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 324 DSL*GELGTGPPLE 283
           DSL GELGTGPPLE
Sbjct: 279 DSLYGELGTGPPLE 292


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,879,852
Number of Sequences: 1657284
Number of extensions: 4672173
Number of successful extensions: 6325
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6324
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)