Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0412
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   7.9  

>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 623 VCENSSLGSHCAGGNTWSTSTDIWEYVELECLC*FMF*FALIVYGENSYNRNTDSL 456
           +C      SHC GG    T   +W Y ++ C   F + F ++ +  N  N+   SL
Sbjct: 318 ICNEEERNSHCLGGTITRT---MW-YFQI-CGSAFSYLFIMLQFDLN--NKKNQSL 366


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +1

Query: 184 NCS---ICRPGLSDKPK*LGNICAQSDKARCVYRTGRCC 291
           NC+   +CR GLS       N+       +C Y  G  C
Sbjct: 571 NCAAYYVCRSGLSYHLSCAENMMFDPMSGKCEYSLGEKC 609


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 249 IRQGEVCLPDGPLLLNPTSL 308
           +R G+ CL  GP   +P SL
Sbjct: 125 VRDGKPCLSGGPKHPDPGSL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,611
Number of Sequences: 336
Number of extensions: 3626
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)