Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0411
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 134 1e-30
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 116 5e-25
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 103 4e-21
UniRef50_Q4PI73 Cluster: Putative uncharacterized protein; n=4; ... 96 7e-19
UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein, puta... 93 5e-18
UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4; ... 82 1e-14
UniRef50_A6R7U2 Cluster: Predicted protein; n=2; Eurotiomycetida... 80 5e-14
UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere... 75 1e-12
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 71 3e-11
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 68 2e-10
UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subuni... 67 4e-10
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 57 3e-07
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 57 3e-07
UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria n... 57 3e-07
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 57 3e-07
UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protei... 53 7e-06
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 52 9e-06
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 50 4e-05
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 49 1e-04
UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus ful... 46 8e-04
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 46 0.001
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 45 0.002
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 45 0.002
UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albica... 44 0.002
UniRef50_Q014C2 Cluster: Small Nuclear ribonucleoprotein splicin... 44 0.004
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 44 0.004
UniRef50_A0DH27 Cluster: Chromosome undetermined scaffold_50, wh... 43 0.007
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 42 0.010
UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 42 0.013
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 42 0.013
UniRef50_P62310 Cluster: U6 snRNA-associated Sm-like protein LSm... 42 0.013
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 41 0.023
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 41 0.023
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 41 0.030
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 41 0.030
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 40 0.039
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 40 0.052
UniRef50_Q4N631 Cluster: Sm protein, putative; n=1; Theileria pa... 40 0.052
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 40 0.052
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 40 0.052
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 40 0.052
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 40 0.069
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 39 0.091
UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18... 39 0.091
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 39 0.12
UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep... 39 0.12
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 39 0.12
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 38 0.16
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 38 0.16
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 38 0.16
UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3; ... 38 0.16
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 38 0.16
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 38 0.21
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.21
UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;... 38 0.28
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 38 0.28
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 38 0.28
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 38 0.28
UniRef50_Q4Q7I2 Cluster: Small nuclear ribonucleoprotein polypep... 38 0.28
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 38 0.28
UniRef50_Q9AVX5 Cluster: Small nuclear ribonucleoprotein SM D2; ... 37 0.37
UniRef50_Q5CK91 Cluster: AlphaSNBP; n=2; Cryptosporidium|Rep: Al... 37 0.37
UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putati... 37 0.37
UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 37 0.37
UniRef50_UPI000021D358 Cluster: PREDICTED: similar to LSM3 homol... 37 0.49
UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 37 0.49
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 37 0.49
UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:... 36 0.64
UniRef50_Q8IGW7 Cluster: RE11655p; n=12; Eukaryota|Rep: RE11655p... 36 0.64
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 36 0.64
UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3; ... 36 0.85
UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.85
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.85
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 36 1.1
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 36 1.1
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 36 1.1
UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T... 36 1.1
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 36 1.1
UniRef50_Q3LVZ4 Cluster: MRNA splicing factor; n=1; Bigelowiella... 35 1.5
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 35 1.5
UniRef50_Q4TAB6 Cluster: Chromosome undetermined SCAF7390, whole... 35 2.0
UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babe... 35 2.0
UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167, w... 35 2.0
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 35 2.0
UniRef50_P63162 Cluster: Small nuclear ribonucleoprotein-associa... 35 2.0
UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;... 34 2.6
UniRef50_A2DLB2 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 34 2.6
UniRef50_P38203 Cluster: U6 snRNA-associated Sm-like protein LSm... 34 2.6
UniRef50_UPI0000D8A096 Cluster: small nuclear ribonucleoprotein ... 34 3.4
UniRef50_Q7R303 Cluster: GLP_385_20544_20344; n=1; Giardia lambl... 34 3.4
UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 34 3.4
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 34 3.4
UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q75CP4 Cluster: ACL125Cp; n=1; Eremothecium gossypii|Re... 33 4.5
UniRef50_A7DRH4 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 33 4.5
UniRef50_Q10013 Cluster: Probable small nuclear ribonucleoprotei... 33 4.5
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 6.0
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q9Y827 Cluster: Triacylglycerol lipase; n=1; Schizosacc... 33 6.0
UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6 sn... 33 6.0
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 33 6.0
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotei... 33 7.9
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 7.9
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 7.9
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1; Plasm... 33 7.9
UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putati... 33 7.9
UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of s... 33 7.9
UniRef50_Q59KX5 Cluster: Potential spliceosomal snRNA Sm core bi... 33 7.9
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 134 bits (325), Expect = 1e-30
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
VDKCIGSRIHI+MK+DKE+VGTL GFDDFVNM+L+DVTE+E TPEGR+ITKLDQILLNGN
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77
Query: 374 NIAMLVPGGEMP 409
NI MLVPGGE P
Sbjct: 78 NITMLVPGGEGP 89
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 116 bits (279), Expect = 5e-25
Identities = 51/69 (73%), Positives = 63/69 (91%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+D+CIGS+I +IMK DKE+VG L+GFD +VNM+L+DVTEYE T EGR++TKLDQILLNGN
Sbjct: 14 IDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEGRRVTKLDQILLNGN 73
Query: 374 NIAMLVPGG 400
NIA+LVPGG
Sbjct: 74 NIAILVPGG 82
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 103 bits (247), Expect = 4e-21
Identities = 43/70 (61%), Positives = 60/70 (85%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+DKC+GS+I IIMKNDKE+ GTL+GFDD++NM+L+DV +Y + +G K T+L+ L+NGN
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVDYSFSADGVKTTELNDALVNGN 75
Query: 374 NIAMLVPGGE 403
N+AMLVPGG+
Sbjct: 76 NVAMLVPGGK 85
>UniRef50_Q4PI73 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 117
Score = 95.9 bits (228), Expect = 7e-19
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 15/90 (16%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVN--------------MLLDDVTEYESTPEG 331
+DKCIGS I +IMK D+E GTL GFDD+VN M+L+DVTEYE+TP+G
Sbjct: 28 IDKCIGSSIWVIMKTDREFSGTLLGFDDYVNAMIDNHSSLAVHADMVLEDVTEYETTPDG 87
Query: 332 -RKITKLDQILLNGNNIAMLVPGGEMPGES 418
+K TKL Q LLNGNNI ML+PG E P +S
Sbjct: 88 KKKKTKLGQTLLNGNNICMLIPGSEGPEDS 117
>UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein,
putative; n=3; Plasmodium|Rep: Small nuclear ribonuclear
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 101
Score = 93.1 bits (221), Expect = 5e-18
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+DKCIGS+I I+MK DKE+VG L GFD++VNM+L+DVTEY +K+ K+ ++LLNG
Sbjct: 16 MDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANNVKKVNKIKKLLLNGL 75
Query: 374 NIAMLVPGGEMPGESYD 424
NI ++VPGG P YD
Sbjct: 76 NITIMVPGG-TPVNYYD 91
>UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4;
Eukaryota|Rep: U6 snRNP-associated protein Lsm5 -
Schizosaccharomyces pombe (Fission yeast)
Length = 80
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+DKCIGS + +IMK+++E GTL GFDD+VN++L DVTEY+ T G K ++LLNGN
Sbjct: 11 IDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYD-TVTG-VTEKHSEMLLNGN 68
Query: 374 NIAMLVPGGE 403
+ ML+PGG+
Sbjct: 69 GMCMLIPGGK 78
>UniRef50_A6R7U2 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 104
Score = 79.8 bits (188), Expect = 5e-14
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 20/92 (21%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDK--------------------EMVGTLQGFDDFVNMLLDDVTEY 313
+DKC+GS+I ++MK DK E GTL GFDD+VNM+L+DVTE+
Sbjct: 11 IDKCVGSKIWVVMKGDKGEEELGSDISPFLSSLTSNSEFSGTLLGFDDYVNMVLEDVTEF 70
Query: 314 ESTPEGRKITKLDQILLNGNNIAMLVPGGEMP 409
+ T G + TKL +ILLNGNNI ML+PGGE P
Sbjct: 71 DYT--GSQ-TKLSKILLNGNNICMLIPGGEGP 99
>UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 93
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+DK IG +I ++M NDKE GTL GFDD+VNM+L++V E+++ EG K + ++LLNG+
Sbjct: 27 IDKSIGHKIQVLMTNDKEFKGTLIGFDDYVNMVLENVEEFDN--EGPKGKVIKKMLLNGS 84
Query: 374 NIAMLVP 394
+AML+P
Sbjct: 85 QVAMLIP 91
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/72 (43%), Positives = 51/72 (70%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+D+ I I +++ +++E GTL GFDDFVN++++DV EY++ P+ ++LL+GN
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVEYDA-PDRAVKRHPGRMLLSGN 67
Query: 374 NIAMLVPGGEMP 409
NI +LVPGG+ P
Sbjct: 68 NITVLVPGGKPP 79
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE----GRKITK-LDQI 358
+DK I ++ I++++++E GTL GFDDFVN++L+D E+ PE K+ + ++
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRM 71
Query: 359 LLNGNNIAMLVPGGE 403
LL+GNNIA+LVPGG+
Sbjct: 72 LLSGNNIAILVPGGK 86
>UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subunit
Lsm5; n=2; Saccharomycetales|Rep: Potential RNA
processing complex subunit Lsm5 - Candida albicans
(Yeast)
Length = 119
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+D+ +G R+ ++M DKE G L GFDD+VNM+L+DVTE + G I K+ LLNG
Sbjct: 58 IDRSVGKRVRVLMTGDKEFNGKLIGFDDYVNMVLEDVTEVDG---GAPIKKM---LLNGG 111
Query: 374 NIAMLVP 394
+IAM+VP
Sbjct: 112 HIAMIVP 118
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
ENPGVTQLNRLAAHPPFASWRNSE
Sbjct: 78 ENPGVTQLNRLAAHPPFASWRNSE 101
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
ENPGVTQLNRLAAHPPFASWRNSE
Sbjct: 32 ENPGVTQLNRLAAHPPFASWRNSE 55
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
ENPGVTQLNRLAAHPPFASWRNSE
Sbjct: 36 ENPGVTQLNRLAAHPPFASWRNSE 59
>UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 80
Score = 57.2 bits (132), Expect = 3e-07
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
+DKC+GS+I +IM KE G L GFDD+VNM+L++VTE
Sbjct: 21 IDKCVGSQIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTE 59
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
ENPGVTQLNRLAAHPPFASWRNSE
Sbjct: 18 ENPGVTQLNRLAAHPPFASWRNSE 41
>UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protein -
Methanosarcina acetivorans
Length = 74
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMV-GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNG 370
V K +GSRI + MK D ++ GTL+ DD++N+ L D E G K+ L ++L G
Sbjct: 7 VQKIVGSRIRVEMKGDLNLLEGTLKSVDDYMNLHLVDTME---IVRGEKVRSLGSVVLRG 63
Query: 371 NNIAMLVP 394
NNI ++ P
Sbjct: 64 NNIILITP 71
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/67 (31%), Positives = 43/67 (64%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+++ + R+ +++K+++ + GTL G+DD++NM+LDDV E KL +++ G+
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDENSENVS----RKLGTVVIRGS 63
Query: 374 NIAMLVP 394
N+ +VP
Sbjct: 64 NVVRIVP 70
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1
Query: 580 GKTLALPNLIALQHIPLSPAGVIA 651
GKTLALPNLIALQHIPLSPAGVI+
Sbjct: 15 GKTLALPNLIALQHIPLSPAGVIS 38
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +2
Query: 215 RIHIIMKNDKEMV--GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
R+ I + + K +V G +QGFD+++N++LD +E + E R+ T + Q+LL G NI+++
Sbjct: 29 RVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASEVYTKKEVRRETSVGQLLLRGENISLI 88
>UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus
fulgidus|Rep: SnRNP, putative - Archaeoglobus fulgidus
Length = 75
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDK-EMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNG 370
V +G I + MK ++ ++VG L+G DD++N+ L + E + K+ L +I+L G
Sbjct: 8 VKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGE---EKVRSLGEIVLRG 64
Query: 371 NNIAMLVPGGE 403
NN+ ++ P E
Sbjct: 65 NNVVLIQPQEE 75
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQ----IL 361
+ K I RI + +++D+ MVG L FD +N++L D EY +G + +L + I+
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIM 60
Query: 362 LNGNNIAMLV 391
L G NI V
Sbjct: 61 LRGENIVTFV 70
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVT-EYESTPEGRKITKLDQILLNGNNIA 382
+ I + +E G L+G+D +N+++DDV EYE +GR L ++L G NI
Sbjct: 33 VDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYE---DGRPTRSLGLVVLRGPNIV 89
Query: 383 MLVPGGEMPGESY 421
++ P G+S+
Sbjct: 90 LVSPTDGSSGKSF 102
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKIT----KLDQILLNGNNIA 382
RI +++ G L+GFD +N++LDDV E PE K+T KL +++ G +
Sbjct: 35 RIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLV 94
Query: 383 MLVP 394
++ P
Sbjct: 95 LIAP 98
>UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albicans
CaSMX4 U6 snRNA-associated Sm-like protein; n=2;
Saccharomycetaceae|Rep: Similar to CA3420|CaSMX4 Candida
albicans CaSMX4 U6 snRNA-associated Sm-like protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 88
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 230 MKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRK-ITK-LDQILLNGNNIAMLVP 394
++ +EM G LQG+D NM+L D EY PEG++ +TK D + + G+++ ++ P
Sbjct: 29 LRGAREMKGKLQGYDSHCNMILSDAVEYIYDVPEGQEPVTKNTDMVFVRGDSVILISP 86
>UniRef50_Q014C2 Cluster: Small Nuclear ribonucleoprotein splicing
factor; n=1; Ostreococcus tauri|Rep: Small Nuclear
ribonucleoprotein splicing factor - Ostreococcus tauri
Length = 110
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNGNNIA 382
+ +R+H++ + + +VGTL+GFD N++L+D E S+ G + L ++ G+N+
Sbjct: 12 VHARVHVLTNDGRHVVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNVC 71
Query: 383 M 385
+
Sbjct: 72 V 72
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +2
Query: 212 SRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLV 391
S+I + + K ++G L+G+D +N++LDD EY S P+ T+L I N + + V
Sbjct: 36 SKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL--ISKNARKLGLTV 93
Query: 392 PGG 400
G
Sbjct: 94 IRG 96
>UniRef50_A0DH27 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 85
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKI-TKLDQILLNGNNIA 382
I +I+I M+N+ E+ GTL +D+ +NM++ E S EG K KLD + L G+ I
Sbjct: 15 IAQQIYIKMRNNIELKGTLVSYDNHLNMIISKAEE-TSFQEGIKTKRKLDALYLRGDGII 73
Query: 383 MLVP 394
++ P
Sbjct: 74 LISP 77
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 212 SRIHIIMKNDKEM--VGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
SRI + + M G + GFD+++N++LDD E S + RK +L +I+L G+NI +
Sbjct: 29 SRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QLGRIMLKGDNITL 86
Query: 386 L 388
L
Sbjct: 87 L 87
>UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 111
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLV 391
+I + + D + G + GFD+++N++LDD E + RK L +ILL G+NI +++
Sbjct: 19 QIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEINVKKDTRK--SLGRILLKGDNITLMM 75
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITK-LDQILLNGNN 376
K + + + +E+ GTL+G+D +N++LDDV E EG + T+ L I+ G
Sbjct: 89 KYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARGTL 148
Query: 377 IAMLVP 394
+ ++ P
Sbjct: 149 LVLISP 154
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+ S + I +K D+E G L+ FD +N++L+D E E +G +L +L+ G+NI
Sbjct: 22 LNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELE---DGEVTRRLGTVLIRGDNIVY 78
Query: 386 LVP 394
+ P
Sbjct: 79 ISP 81
>UniRef50_P62310 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=39; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm3 - Homo sapiens (Human)
Length = 102
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+ RI++ M+ND+E+ G L +D +NM+L DV E +T E + T + NI M
Sbjct: 25 LDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPM 84
Query: 386 LVPGGE 403
L G+
Sbjct: 85 LFVRGD 90
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 IMKNDKEMV-GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
+++ND + G L GFD+++N++LD EY+ + K +L +ILL G NI ++
Sbjct: 35 LVENDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKATK--ELGKILLKGENIVLV 87
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 41.1 bits (92), Expect = 0.023
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+D+ I + I +K +K + G L GFD +N+LLD E + E + L I++ G+
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGEAK---GLGSIVVRGD 66
Query: 374 NIAMLVP 394
N+ M+ P
Sbjct: 67 NVVMISP 73
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
ENP +TQ +RL AHPPF SWR+ E
Sbjct: 25 ENPQITQYHRLEAHPPFHSWRDVE 48
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 40.7 bits (91), Expect = 0.030
Identities = 17/59 (28%), Positives = 36/59 (61%)
Frame = +2
Query: 212 SRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
S++ I + ++ +VGTL+GFD F+N+++D+ E G + +++ GN++ M+
Sbjct: 32 SKLQIKLNANRVVVGTLRGFDQFMNLVIDNTMEV----NGNDKNDIGMVVIRGNSVVMI 86
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 40.3 bits (90), Expect = 0.039
Identities = 17/65 (26%), Positives = 38/65 (58%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
K + + + + ++ + G L+GFD F+NM++D+ EY+ +G + L ++ GN++
Sbjct: 11 KYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQK--DGGSV-NLGMTVIRGNSV 67
Query: 380 AMLVP 394
++ P
Sbjct: 68 VIMEP 72
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 39.9 bits (89), Expect = 0.052
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNG 370
++ I + II + + +GTL+GFD +N+++D+ E ST G + L ++ G
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRG 63
Query: 371 NNIAML 388
+NIA++
Sbjct: 64 DNIAVI 69
>UniRef50_Q4N631 Cluster: Sm protein, putative; n=1; Theileria
parva|Rep: Sm protein, putative - Theileria parva
Length = 84
Score = 39.9 bits (89), Expect = 0.052
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 218 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE 328
I++ KN +E+VG LQ FD+ NM+L +VTE +T E
Sbjct: 22 IYLKCKNGRELVGRLQAFDEHCNMVLSEVTETITTVE 58
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/61 (27%), Positives = 38/61 (62%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVP 394
R+ + +++++G L+G+D F+N++LD+ +E G K+ + +++ GN++ ML
Sbjct: 4 RVFCQLNGNRKVIGILRGYDVFMNIVLDEA--FEEKQGGEKVA-IGMVVIRGNSVVMLEY 60
Query: 395 G 397
G
Sbjct: 61 G 61
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/58 (29%), Positives = 37/58 (63%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
R+ + +++++G L+G+D F+N++LD+ +E G K+ + I++ GN++ ML
Sbjct: 26 RVFCQLNGNRKVIGILRGYDVFMNIVLDEA--FEEKQGGEKVA-IGMIVIRGNSVVML 80
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNG 370
++ I + +I + + +VGTL+GFD +N++LD+ E S+ +G + L ++ G
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 371 NNIAML 388
+N+A++
Sbjct: 65 DNVAVI 70
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYE--STPEGRKITKLDQILLNGNNIAML 388
G ++GFD+F+N+++DD E + + K L QILL G+N++++
Sbjct: 45 GKIRGFDEFMNLVVDDAVEVRMATKTDEEKRRPLGQILLKGDNVSLI 91
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 39.1 bits (87), Expect = 0.091
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+++ + S + + +K +E GTL G+D +N++L D E ++ G + K+ +++ G+
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQN---GEVVRKVGSVVIRGD 65
Query: 374 NIAML--VPGGE 403
+ + PGGE
Sbjct: 66 TVVFVSPAPGGE 77
>UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 92
Score = 39.1 bits (87), Expect = 0.091
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
G + GFD+++N++LDD E + RK L +I+L G+NI +L
Sbjct: 45 GCIIGFDEYMNLVLDDAEEVHMKTKNRK--PLGRIMLKGDNITLL 87
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQI 358
+ K + + + +E+ G L+G+D +N++LDDV E ITKLD++
Sbjct: 55 LSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSLNDITKLDEV 109
>UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep:
Sm-like protein - Sulfolobus acidocaldarius
Length = 87
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 MKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRKITKLDQILLNGNNIAML 388
+KN +E VG L+ D +N++L D TEY E T + + K ++L+ G+NI +
Sbjct: 24 LKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSD--PVAKYGRVLIRGSNILFI 75
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/63 (25%), Positives = 38/63 (60%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
K + ++ + + +++ G L+G+D F+N++L+D E +G K+ K+ + + GN++
Sbjct: 11 KYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLED--SIEEKVDGEKV-KIGSVAIRGNSV 67
Query: 380 AML 388
M+
Sbjct: 68 IMI 70
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
K + ++ I + ++ + G L+GFD F+N+ L D E S E +I +++ GN+I
Sbjct: 13 KLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEI---GMVIIRGNSI 69
Query: 380 AMLVP 394
++ P
Sbjct: 70 LLMEP 74
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNG 370
++ + + + II + + VGTL+GFD +N++LD+ E S G + L ++ G
Sbjct: 71 LESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRG 130
Query: 371 NNIAML 388
+N+A++
Sbjct: 131 DNVAVI 136
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/65 (26%), Positives = 39/65 (60%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+ K + +I + + ++ G + GFD+++NM+LD+ +E + ++ ++ +ILL G
Sbjct: 20 LQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKTNQKR--EIGRILLKGE 77
Query: 374 NIAML 388
NI ++
Sbjct: 78 NITLI 82
>UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 690
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +2
Query: 209 GSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
G + + +K+ + + G L D ++N+ L +V + ++P+G K T+L +I + GNNI L
Sbjct: 13 GHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQ--TSPDGDKFTRLPEIYVKGNNIKYL 70
Query: 389 VPGGEMPGESYD 424
MP E D
Sbjct: 71 ----RMPDEIID 78
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
V K + R+ + + + + G L+GFD F+N++LDD E + K + +++ GN
Sbjct: 9 VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTV--EECKDNTK-NNIGMVVIRGN 65
Query: 374 NIAML 388
+I M+
Sbjct: 66 SIVMV 70
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
++ + + ++ + G L+GFD F+N++LDD T +T + T + +++ GN++ +
Sbjct: 34 KLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTTEK----TPMGMVVVRGNSVVSM 87
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2
Query: 455 IKQHLNLQXXXXXTRGGARYPIRPIVSRIT 544
++ N RGGARYPIRPIVSRIT
Sbjct: 246 VRNEFNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 89
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
GTL GFD ++N++L D E R+ K+ ILL G NI+++
Sbjct: 41 GTLSGFDQYINLVLTDTEEVYLKTNTRR--KIGTILLKGENISVI 83
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
RI + + + ++G L G+D+++N++LD+ + S P+ K + I++ GN+I
Sbjct: 15 RILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD-ASNPDTDKHIPIGMIMILGNSI 68
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 263 QGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVPGGE 403
+GFD+++N++LD+ E + RK L +ILL G+NI +++ G+
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDTRK--SLGRILLKGDNITLMMNTGK 141
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/61 (26%), Positives = 37/61 (60%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
K + R+ I + ++++VG L+G+D F+N++LD+ E + + + +++ GN+I
Sbjct: 16 KFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKDEQ----IDIGVVVIRGNSI 71
Query: 380 A 382
+
Sbjct: 72 S 72
>UniRef50_Q4Q7I2 Cluster: Small nuclear ribonucleoprotein
polypeptide e, putative; n=4; Trypanosomatidae|Rep:
Small nuclear ribonucleoprotein polypeptide e, putative
- Leishmania major
Length = 86
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVPGG 400
G L G+D+F+N++L D T E+ K +L +ILL +N+ ++ P G
Sbjct: 39 GNLLGYDEFMNVVLGDTT--ETNLRNSKSYRLGKILLRSDNVGVIYPIG 85
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+ + IGS + + + N E +G LQ D ++N++LD+ E+ + R + + GN
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQAR---NYGDVFIRGN 77
Query: 374 N 376
N
Sbjct: 78 N 78
>UniRef50_Q9AVX5 Cluster: Small nuclear ribonucleoprotein SM D2;
n=1; Guillardia theta|Rep: Small nuclear
ribonucleoprotein SM D2 - Guillardia theta (Cryptomonas
phi)
Length = 82
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 218 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY----ESTPEGRKITK--LDQILLNGNNI 379
+ II++N+K M+G + +D +N+LL++V E E+ E KI + ++ L G+NI
Sbjct: 17 VMIILRNNKRMIGKIINYDKHLNLLLENVNEIKFVGENFSELIKIKSKFIPKVFLRGDNI 76
Query: 380 AMLV 391
+++
Sbjct: 77 VLIL 80
>UniRef50_Q5CK91 Cluster: AlphaSNBP; n=2; Cryptosporidium|Rep:
AlphaSNBP - Cryptosporidium hominis
Length = 377
Score = 37.1 bits (82), Expect = 0.37
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFD-DFVNMLLDDVTEYESTPEG----RKITKLDQI 358
V + IGS+I II +NDK G L D D + L DV +E+ P G T + I
Sbjct: 2 VHEYIGSKITIISRNDKRYEGVLHSIDVDKSTITLKDVRYFENGPNGAPGPASSTVFEMI 61
Query: 359 LLNGNNIAML 388
+ G++I L
Sbjct: 62 VFRGSDITDL 71
>UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putative;
n=2; Theileria|Rep: Small nuclear ribonucleoprotein,
putative - Theileria parva
Length = 91
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 209 GSRIHIIM--KNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIA 382
G+R+ I + + + ++ GT++GFD+++NM+LD+ TE +K + +ILL G+ +
Sbjct: 26 GTRVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKKNVKK--DVGRILLKGDCMT 83
Query: 383 ML 388
++
Sbjct: 84 LI 85
>UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 93
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVP 394
R+H+ + M G L GFD+++N++L D YE P+ L LL G + M+ P
Sbjct: 30 RVHLNDNSKMYMEGNLLGFDEYMNLVLGD--SYEVYPKENTRVPLGTSLLRGECVGMVHP 87
>UniRef50_UPI000021D358 Cluster: PREDICTED: similar to LSM3 homolog,
U6 small nuclear RNA associated; n=3; Homo/Pan/Gorilla
group|Rep: PREDICTED: similar to LSM3 homolog, U6 small
nuclear RNA associated - Homo sapiens
Length = 101
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE 328
RI + M+ND+E+ G L +D +NM+L DV E +T E
Sbjct: 27 RICVKMRNDRELRGRLHTYDQHLNMILGDVEETVTTIE 64
>UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 89
Score = 36.7 bits (81), Expect = 0.49
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYE 316
IG ++ I ++N++E+ GTL D F N++L+D E +
Sbjct: 20 IGHKVFIKLENNRELEGTLMSLDQFGNLVLNDTVELQ 56
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 36.7 bits (81), Expect = 0.49
Identities = 16/63 (25%), Positives = 36/63 (57%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
K + ++ + + + + G L+GFD F+N+++D+ E ++ + I +++ GN+I
Sbjct: 11 KFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNI---GMVVIRGNSI 67
Query: 380 AML 388
ML
Sbjct: 68 IML 70
>UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:
SmE protein - Leptomonas collosoma
Length = 94
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAML 388
G L G+D+F+N++L D TE S + ++ T L +ILL +N+ ++
Sbjct: 47 GNLLGYDEFMNVVLGDATETNS--KTKESTHLGKILLRSDNVGVV 89
>UniRef50_Q8IGW7 Cluster: RE11655p; n=12; Eukaryota|Rep: RE11655p -
Drosophila melanogaster (Fruit fly)
Length = 103
Score = 36.3 bits (80), Expect = 0.64
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE 328
+ ++++ M+N++E+ G L FD +NM+L D E +T E
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVE 66
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
K + RI + +E+ GTL+G+D +N++LDDV E
Sbjct: 60 KYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQE 96
>UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 136
Score = 35.9 bits (79), Expect = 0.85
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 239 DKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVP 394
D + G + GFD+F+N+ L D E + + +++ +L +ILL G+NI P
Sbjct: 34 DFRIEGKIIGFDEFMNVTLADAEEVWTKKDNKRV-ELGRILLKGDNIVGAPP 84
>UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm4;
n=3; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm4 - Saccharomyces cerevisiae (Baker's yeast)
Length = 187
Score = 35.9 bits (79), Expect = 0.85
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +2
Query: 209 GSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY--------ESTPEGRKITKLDQILL 364
G ++ I +KN + + G L D+++N+ L +VTEY E E K KL++I +
Sbjct: 12 GQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKLNEIYI 71
Query: 365 NGNNIAML 388
G I +
Sbjct: 72 RGTFIKFI 79
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 35.9 bits (79), Expect = 0.85
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE--YESTPE--GRKITKLDQILLNGN 373
+ R++I ++ + +VGTLQ FD N++L D E Y+ E + + + + G+
Sbjct: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGD 71
Query: 374 NIAMLVPGGEMPGESYDG 427
+ ++ P E DG
Sbjct: 72 TVTLI----STPSEDDDG 85
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +2
Query: 200 KCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKIT-----KLDQILL 364
K + + + + +++ GTL+G+D +N++LD+ E+ P+ + T +L I+
Sbjct: 27 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVC 86
Query: 365 NGNNIAMLVP 394
G + ++ P
Sbjct: 87 RGTAVMLVSP 96
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRKIT----KLDQI 358
++K + +++ +E+ G L+G D N++LDD EY + + + K+T L +
Sbjct: 17 LNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKRNLGLL 76
Query: 359 LLNGNNIAMLVP 394
+ G ++ ++ P
Sbjct: 77 VARGTSVTVVYP 88
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 230 MKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVP 394
+K K + G L FD +N++LDD E + E +L ++L+ G+++ ++ P
Sbjct: 19 LKTGKTLRGRLVSFDGHLNLVLDDCVEIDEDSE----VRLGRVLIRGDSVTLISP 69
>UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2;
Thermoprotei|Rep: Small nuclear ribonucleoprotein -
Cenarchaeum symbiosum
Length = 106
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/87 (16%), Positives = 40/87 (45%)
Frame = +2
Query: 128 VRRKKMTQSSXXXXXXXXXXXXVDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVT 307
+RR+ ++ + K + + +KN+ E G ++ D ++N+++ D
Sbjct: 17 IRRRSPSEYPVSQSNAKRPLTALQKSTKKAVTVRLKNETEYKGKMENVDSYMNLIMTDAE 76
Query: 308 EYESTPEGRKITKLDQILLNGNNIAML 388
E+ + + + ++++ GNN+ +
Sbjct: 77 EFH---DSKVVANYGRVIVRGNNVLFI 100
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYE-STPEGR----KITKLDQILLNGNNIAML 388
G + GFD+F+N+++D+ E ++ +G+ K T L +ILL G+NI ++
Sbjct: 41 GKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLI 90
>UniRef50_Q3LVZ4 Cluster: MRNA splicing factor; n=1; Bigelowiella
natans|Rep: MRNA splicing factor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 101
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY--ESTPEGRKITK 346
+ S+I I ++ + G ++GFD N++L+DVTE E T + R + K
Sbjct: 27 LNSKIIISSNDNHKFYGFIRGFDKHCNLMLEDVTEIWKEETTDARSLKK 75
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 585 NPGVTQLNRLAAHPPFASWRN 647
N +T LNRL AHP FASWR+
Sbjct: 25 NQTITHLNRLPAHPVFASWRD 45
>UniRef50_Q4TAB6 Cluster: Chromosome undetermined SCAF7390, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7390,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 268
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-------ESTPEGRKITKLDQILL 364
I R+ I+++ + +GT + FD +N++L D E+ PE + L +LL
Sbjct: 20 IDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPEREEKRVLGLVLL 79
Query: 365 NGNNIAMLVPGGEMPGES 418
G N+ + G P ++
Sbjct: 80 RGENLVSMTVEGPPPKDA 97
>UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babesia
bovis|Rep: Sm domain containing protein - Babesia bovis
Length = 159
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +2
Query: 215 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYEST----PEGRKI---TKLDQILLNGN 373
R+ + +K+ ++ VGT FD +N++L D E+ T P+ +K+ L I+L G
Sbjct: 15 RVRVAIKDGRKFVGTFIAFDKHMNLVLADCEEFRITKGKGPDKQKVELKRTLGFIMLRGE 74
Query: 374 NI 379
NI
Sbjct: 75 NI 76
>UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_167, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 138
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEG-RKI-TK--LDQILLNGN 373
I R+ I + + + +VGT FD +N++L + EY +G +I TK L I++ G+
Sbjct: 11 IDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVRGD 70
Query: 374 NIAML 388
NI L
Sbjct: 71 NIISL 75
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
IG ++ + +++ E+ G L+ FD VN+LL+D E +G + K +++ G N+
Sbjct: 20 IGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDA---EEIIDG-NVYKRGTMVVRGENVLF 75
Query: 386 LVP 394
+ P
Sbjct: 76 ISP 78
>UniRef50_P63162 Cluster: Small nuclear ribonucleoprotein-associated
protein N; n=94; Eukaryota|Rep: Small nuclear
ribonucleoprotein-associated protein N - Homo sapiens
(Human)
Length = 240
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYE-------STPEGRKITKLDQILL 364
I R+ I+++ + +GT + FD +N++L D E+ PE + L +LL
Sbjct: 13 IDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLL 72
Query: 365 NGNNIAMLVPGGEMPGES 418
G N+ + G P ++
Sbjct: 73 RGENLVSMTVEGPPPKDT 90
>UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lsm-1 - Caenorhabditis elegans
Length = 125
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/60 (21%), Positives = 34/60 (56%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+ ++ +++++ ++++G L+ D F N++L+DV E + T +L+ G N+ +
Sbjct: 18 LDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVEL 77
>UniRef50_A2DLB2 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 76
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 221 HIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
H+++ +++GTL D N++L D E + G ++ K I + GN +
Sbjct: 20 HVVLSTGSQLIGTLCTIDALFNLVLRDAVEMSN---GNEVGKYQSIFIRGNQV 69
>UniRef50_P38203 Cluster: U6 snRNA-associated Sm-like protein LSm2;
n=28; Fungi/Metazoa group|Rep: U6 snRNA-associated
Sm-like protein LSm2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 95
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVT 307
+ + + +KND E+ GTLQ D F+N+ LD+++
Sbjct: 11 VDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNIS 44
>UniRef50_UPI0000D8A096 Cluster: small nuclear ribonucleoprotein
(snrnp),putative; n=1; Eimeria tenella|Rep: small
nuclear ribonucleoprotein (snrnp),putative - Eimeria
tenella
Length = 125
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+G I + K GTL+ +D +NML+ VT T + K+ L+Q+ + G+ + M
Sbjct: 18 LGHTITVETKTGSLYRGTLENAEDNMNMLIQGVT---VTHKDGKVLSLEQVYIRGSQVQM 74
Query: 386 LV 391
++
Sbjct: 75 VI 76
>UniRef50_Q7R303 Cluster: GLP_385_20544_20344; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_385_20544_20344 - Giardia lamblia
ATCC 50803
Length = 66
Score = 33.9 bits (74), Expect = 3.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVT 307
IGSR+ +I ++ GT++ D++ N+LL DV+
Sbjct: 11 IGSRVELIFTTGDKLTGTIEATDEYENILLADVS 44
>UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 158
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 373
+ K I SR+ +++ + + VG + FD N++L D EY RK +L +
Sbjct: 9 LSKFINSRVKVVISDHRYFVGQMLAFDTHSNIVLKDCEEYRRL-NRRKAGELQEA---KR 64
Query: 374 NIAMLVPGGE 403
NI +++ GE
Sbjct: 65 NIGLMILRGE 74
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
++K G R+ I + + ++GT+ GFD F+N++LD E
Sbjct: 18 LNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKE 56
>UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 193
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 209 GSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYES 319
G +I I +KN + + G L D+++N+ L DV +Y+S
Sbjct: 12 GQKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDS 48
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+ ++ +++++ ++ +G ++ FD F N++L D E + L + G+N+ +
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVI 68
Query: 386 L 388
L
Sbjct: 69 L 69
>UniRef50_Q75CP4 Cluster: ACL125Cp; n=1; Eremothecium gossypii|Rep:
ACL125Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 106
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEG 331
+G R+ ++ + +V TL+GFD N+LL DV + +T EG
Sbjct: 9 LGRRVVVVTTDGGCLVATLEGFDKTANLLLSDVRQ-RATGEG 49
>UniRef50_A7DRH4 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 80
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 230 MKNDKEMVGTLQGFDDFVNMLL---DDVTEYESTPEGRKITKLDQIL 361
++N+K + GTL+ FD +N+ L +DV+E + P G+ + + D IL
Sbjct: 24 LRNNKTVQGTLKDFDIHMNLTLENAEDVSEEKPNPIGKVLLRGDNIL 70
>UniRef50_Q10013 Cluster: Probable small nuclear ribonucleoprotein
Sm D1; n=10; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein Sm D1 - Caenorhabditis elegans
Length = 126
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 218 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLV 391
++I +KN ++ GT+ G D +N L V+ T + ++ KLD + + GNNI ++
Sbjct: 15 VNIELKNGTQVSGTIMGVDVAMNTHLRAVS---MTVKNKEPVKLDTLSIRGNNIRYII 69
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 539 YDSL*GELGTGPPLE 495
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY 313
++K I + + +E++G L+GFD N++LD+ EY
Sbjct: 24 LNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVEY 63
>UniRef50_Q9Y827 Cluster: Triacylglycerol lipase; n=1;
Schizosaccharomyces pombe|Rep: Triacylglycerol lipase -
Schizosaccharomyces pombe (Fission yeast)
Length = 483
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPE---GRKITKLDQILLNGNNIAMLVPGGEMPGESYD 424
GT + D+F+ +L +T E TP+ KIT+ ++ L N A+++ GG G ++
Sbjct: 95 GTKKLIDEFIQEVLMCLTYLEETPDLSLDEKITEFSRLKLTTGNTALILSGGGTFGMTHI 154
Query: 425 G 427
G
Sbjct: 155 G 155
>UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8 - Yarrowia
lipolytica (Candida lipolytica)
Length = 97
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTP-EGRKITKLDQILLNGNNIA 382
I + +I + + ++G LQG+D N++L + E TP E ++ L +L G+ IA
Sbjct: 8 INKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYMLRGDCIA 67
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
+ + + +K + + GTL+ D +N++LDD E + T + I + ++L+ GN +
Sbjct: 20 VNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEELD-TRTNQVIVRYGKVLIRGNQV 76
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 32.7 bits (71), Expect = 7.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 582 ENPGVTQLNRLAAHPPFASWRNSE 653
+NP +T +NRL +H P WR+++
Sbjct: 28 QNPAITSVNRLPSHTPLHGWRDAD 51
>UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Guillardia theta|Rep: Putative small nuclear
ribonucleoprotein E - Guillardia theta (Cryptomonas phi)
Length = 78
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 218 IHIIMK--NDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
+ II K ND + G L GFD+F+N+++++ TE + + + L +L+ G++I
Sbjct: 18 VTIIFKGSNDYILEGNLIGFDEFMNLVIENTTEKK---DSLIVRDLGYVLIKGDSI 70
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAM 385
+ R+ + +++ ++GTL+ FD F N++L+ E + L ++ G N+ +
Sbjct: 17 LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVL 76
Query: 386 L 388
+
Sbjct: 77 M 77
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 32.7 bits (71), Expect = 7.9
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 218 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY 313
+ + + +E+ GTL+G+D +N++LD+ E+
Sbjct: 18 VRVKLSGGREVTGTLKGYDQLLNLVLDEAIEH 49
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 194 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
++ + I +I + + +VGTL+GFD N++LD+ E
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1;
Plasmodium falciparum 3D7|Rep: Ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 74
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Frame = +2
Query: 218 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YE-STPEGRKIT------KLDQILLNGN 373
I + K D+E++G L +D+ +NM+L +V E Y+ S E + T LD + + G+
Sbjct: 5 IFLKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKENDEETVKKMERNLDMVFVRGD 64
Query: 374 NIAML 388
+I ++
Sbjct: 65 SIILV 69
>UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putative;
n=6; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 113
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 254 GTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNI 379
GT++ + +N+LL D T+ T G K TK+D + + G+NI
Sbjct: 30 GTVEELQNNMNVLLKDATK---TARGGKETKMDSVFVRGSNI 68
>UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 101
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 IGSRIHIIMK-NDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIA 382
IG ++ + +K N E GTL D+++N+ LD +E +K + +I + NN+
Sbjct: 17 IGKQVIVRLKWNKTEYKGTLISIDNYMNLQLDKTSEVIYEDGEKKEEVIGEIFIRCNNVL 76
Query: 383 MLVPGGEMPGESYDG 427
+ E+ S G
Sbjct: 77 FIREDKEVQNGSDSG 91
>UniRef50_Q59KX5 Cluster: Potential spliceosomal snRNA Sm core
binding protein B/B'; n=1; Candida albicans|Rep:
Potential spliceosomal snRNA Sm core binding protein
B/B' - Candida albicans (Yeast)
Length = 110
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEG----RKITKLDQILLNGN 373
I RI II +++ +GTL FD +N++L D E T + +K T +++ +
Sbjct: 5 INFRIKIITIDNRTYLGTLLSFDKHMNLVLSDTEESRITKKSYSQLKKHTPNVELVYDKR 64
Query: 374 NIAMLVPGGE 403
N+ +++ G+
Sbjct: 65 NLGLIILRGD 74
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 32.7 bits (71), Expect = 7.9
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
+ RI + ++ +++ GTL+GFD F+N+++D+ E
Sbjct: 60 LDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIE 94
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 32.7 bits (71), Expect = 7.9
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = +2
Query: 206 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE 310
+ ++ ++++++KE +G L+ +D F N++L + E
Sbjct: 101 VDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHE 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,883,052
Number of Sequences: 1657284
Number of extensions: 12021272
Number of successful extensions: 24777
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 24193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24758
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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