Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0409
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129464-1|AAM76206.1|  981|Drosophila melanogaster SD10723p pro...    31   1.0  
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P...    31   1.0  
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P...    31   1.0  
AE014296-861|AAF47911.2|  456|Drosophila melanogaster CG11350-PB...    29   5.5  
X67703-2|CAA47938.1|   74|Drosophila melanogaster Mst84Db protein.     28   7.2  
BT023158-1|AAY55574.1|  342|Drosophila melanogaster IP09321p pro...    28   7.2  
AE014298-2005|AAF48347.1|  273|Drosophila melanogaster CG11585-P...    28   7.2  

>AY129464-1|AAM76206.1|  981|Drosophila melanogaster SD10723p
           protein.
          Length = 981

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 276 YKSYFAPAVAVLAPIVKGGAPAESSVSFYSTQTSHG 383
           Y + +A A A  A    GG P   +V+ Y+ QT HG
Sbjct: 471 YPNPYAAAAAAAAAAAAGGGPFNVNVNAYAMQTPHG 506


>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
            isoform B protein.
          Length = 2309

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 276  YKSYFAPAVAVLAPIVKGGAPAESSVSFYSTQTSHG 383
            Y + +A A A  A    GG P   +V+ Y+ QT HG
Sbjct: 1799 YPNPYAAAAAAAAAAAAGGGPFNVNVNAYAMQTPHG 1834


>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
            isoform A protein.
          Length = 2309

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 276  YKSYFAPAVAVLAPIVKGGAPAESSVSFYSTQTSHG 383
            Y + +A A A  A    GG P   +V+ Y+ QT HG
Sbjct: 1799 YPNPYAAAAAAAAAAAAGGGPFNVNVNAYAMQTPHG 1834


>AE014296-861|AAF47911.2|  456|Drosophila melanogaster CG11350-PB
           protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
 Frame = +3

Query: 282 SYFAPAVAVLAPIVKGGAPAES--------SVSFYSTQTSHGAPFLTKTIXXXXXXXXXX 437
           SY APAV+  AP     APA +        +VS+ +   S+ AP  T T           
Sbjct: 76  SYAAPAVSYAAPAQSYSAPAATYTAAASAPAVSYAAPAQSYSAPAATYTAAASAPAVSYA 135

Query: 438 XXXXXXXXXXPLATYAAHAAPVGYFAPYTNY 530
                        T AA A  V Y AP   Y
Sbjct: 136 APAQSYSAPAATYTAAASAPAVTYAAPAQTY 166


>X67703-2|CAA47938.1|   74|Drosophila melanogaster Mst84Db protein.
          Length = 74

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +2

Query: 431 CRTCCSLRWACWTTRNLCRTCSPCWLLRPLHKLWPCRSF 547
           C +CC+    C      C  C PC L  P     PCR +
Sbjct: 35  CGSCCAPWGPCGPCGPCCGGCGPCGLCGPC--CGPCRPY 71


>BT023158-1|AAY55574.1|  342|Drosophila melanogaster IP09321p
           protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 282 SYFAPAVAVLAPIVKGGAPAESSVSFYSTQTSHGA 386
           SY APA +  A  V   APA +  S+ +   SHG+
Sbjct: 93  SYSAPAASASASHVSYSAPAAAHSSYAAPSVSHGS 127


>AE014298-2005|AAF48347.1|  273|Drosophila melanogaster CG11585-PA
           protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 282 SYFAPAVAVLAPIVKGGAPAESSVSFYSTQTSHGA 386
           SY APA +  A  V   APA +  S+ +   SHG+
Sbjct: 24  SYSAPAASASASHVSYSAPAAAHSSYAAPSVSHGS 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,274,748
Number of Sequences: 53049
Number of extensions: 305068
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)