Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0406
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 296 1e-80
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 296 1e-80
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 33 0.23
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 33 0.23
SB_51702| Best HMM Match : SURF6 (HMM E-Value=4) 32 0.53
SB_11670| Best HMM Match : TP2 (HMM E-Value=3.5) 30 1.6
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 30 2.1
SB_24645| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.7
SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0) 29 3.7
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 3.7
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 28 6.5
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 28 8.6
SB_36428| Best HMM Match : MutS_V (HMM E-Value=2.1e-33) 28 8.6
SB_18905| Best HMM Match : Nop (HMM E-Value=0) 28 8.6
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 296 bits (727), Expect = 1e-80
Identities = 147/195 (75%), Positives = 163/195 (83%), Gaps = 1/195 (0%)
Frame = +1
Query: 130 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 309
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 310 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQG 486
+S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQG
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 487 LDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIV 666
LD L +RCAQYKKDGC FAKWRCVLKI TPS A++ENANVLARYASICQ +VPIV
Sbjct: 126 LDGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYASICQQNGLVPIV 185
Query: 667 EPEVLPDGEHDLDRA 711
EPEVL DG+H L+RA
Sbjct: 186 EPEVLCDGDHTLERA 200
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 296 bits (727), Expect = 1e-80
Identities = 147/195 (75%), Positives = 163/195 (83%), Gaps = 1/195 (0%)
Frame = +1
Query: 130 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 309
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 310 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQG 486
+S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQG
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 487 LDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIV 666
LD L +RCAQYKKDGC FAKWRCVLKI TPS A++ENANVLARYASICQ +VPIV
Sbjct: 126 LDGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYASICQQNGLVPIV 185
Query: 667 EPEVLPDGEHDLDRA 711
EPEVL DG+H L+RA
Sbjct: 186 EPEVLCDGDHTLERA 200
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 348 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 518
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 359 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 418
Query: 519 QEGRLPLRQ 545
+ GR P Q
Sbjct: 419 EPGRPPYEQ 427
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Frame = +3
Query: 348 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 518
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 324 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 383
Query: 519 QEGRLPLRQVALRAEDRPQHPL--VPSYPGK 605
+ GR P RP H L P PG+
Sbjct: 384 EPGRPP------HEPGRPPHELGRPPHEPGR 408
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 348 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 518
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 125 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 184
Query: 519 QEGRLPLRQ 545
+ GR P Q
Sbjct: 185 EPGRPPYEQ 193
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Frame = +3
Query: 348 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 518
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 90 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 149
Query: 519 QEGRLPLRQVALRAEDRPQHPL--VPSYPGK 605
+ GR P RP H L P PG+
Sbjct: 150 EPGRPP------HEPGRPPHELGRPPHEPGR 174
>SB_51702| Best HMM Match : SURF6 (HMM E-Value=4)
Length = 260
Score = 31.9 bits (69), Expect = 0.53
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = +1
Query: 154 KKIAQAIVAPA-KGILAADESTGTMGKRLQDIGVENT-EENRRRYRQLLFSSDAVLSENI 327
K +A++ +A K E TGT +QD G NT + ++ + + + S VLS +
Sbjct: 92 KHVARSFIAELEKRKQTGKEGTGTDASEMQDSGAVNTCQSDKHVFTKHVAESKVVLSPSS 151
Query: 328 ---SGVILFHE-TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDD 495
GV++ E + QK D V+ E +G + + G+ L ++E + +
Sbjct: 152 HGKQGVLMMPEYVVGQKPDKQKKKVTRDESQGSVKSQEKTVGITHLQVEQEEVEEEEIST 211
Query: 496 LAQRCAQYKKD 528
+ ++D
Sbjct: 212 TTLTAGENQRD 222
>SB_11670| Best HMM Match : TP2 (HMM E-Value=3.5)
Length = 543
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 498 RPALRPVQEGRLPLRQVALRAEDRP-QHPLVPSYPGKRQCSRPLRFHLSEPTHRADCRAR 674
+P +R + R+ + +A++A +RP P + S P K SRPL + T R + +R
Sbjct: 442 KPCVRKLGLARVTRKVMAVKAFERPLAGPSIDSGPAKTAPSRPLMNPAAALTRRRNLVSR 501
Query: 675 SLT 683
+L+
Sbjct: 502 TLS 504
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 325 ISGVILFHETLYQKADDGTPLVSLLEKK 408
+SG ++ +E L+Q DD TPLV +L ++
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +3
Query: 375 WNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGR---PRPALRPVQEGRLP 536
W G+P G P GR G P G + G+ PRP +RP + GR+P
Sbjct: 515 WRPGGIPGRTPGRRPG--GRPGNIPPFVPGLIIPSRRPGKRPGPRPGIRPGRGGRIP 569
>SB_24645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/94 (28%), Positives = 41/94 (43%)
Frame = +1
Query: 115 YFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 294
Y Q E ELK+ Q+ + I + +S G GK + E EE RY +
Sbjct: 91 YLQMNDEESLPELKRARQSFITMVTRINNSSQSVGKDGKAKTSLFSE--EEKDTRYLVIA 148
Query: 295 FSSDAVLSENISGVILFHETLYQKADDGTPLVSL 396
FS+D S I+ + +T + + D L+SL
Sbjct: 149 FSNDHFTSAFIAESGITRKT--EDSADWLRLISL 180
>SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +3
Query: 426 QGRQGCRPAVRIGRRM-HHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPG 602
QG +P ++ + + PG P+PA PV R + + P+ P +PG
Sbjct: 783 QGSTSAQPDEQLAQELAQEPGKQHPKPARTPVAAVPAAARDARITS---PEPPATRPHPG 839
Query: 603 KRQCSRPL-RFHLSEPTHRADCRARSLT*WRARPGP 707
+ + R L +++ + + R + PGP
Sbjct: 840 RVEAGRRLAKWNRTNRAKKEALRVAAAQQLPVTPGP 875
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 515 WAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSR 393
WAQ ++ SS PW S + SGT S+L ++ +S +
Sbjct: 5909 WAQNYSSSSSPWAPSSPASVRSGTYS-SSLATDILDTYSQK 5948
>SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)
Length = 647
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 79 NTRIKK*STMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVEN 258
NT+ + S + F++P+PE Q+ IA+A + I E + + ++ EN
Sbjct: 49 NTQPRSPSDLLALFRFPSPEAQQ----IARAAEVFERTIQLVHEHVADL--EMVNVTSEN 102
Query: 259 TEENRRRYRQLLFSSDAVLSENISG 333
E N+ + LL + + N+SG
Sbjct: 103 GERNQHSFFDLLSPAYIKMIANLSG 127
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 136 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVL 315
E+Q+ L K AQ +V+ +KG+ D + + K + +N E++R R + S D
Sbjct: 1006 EIQQGLNKAAQCVVSVSKGVSQWDRTCRALRKAEKRDDSDN-EDSRSRSASNVGSDDESR 1064
Query: 316 SE 321
SE
Sbjct: 1065 SE 1066
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.7 bits (61), Expect = 4.9
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +3
Query: 420 RHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYP 599
R R+ RP + GR G RP R + GR P R + D + P PS P
Sbjct: 660 RDDPREDRRPGMSEGR-----GRDRPERPDRTGERGREP-RYSTPQGPDYHRRPS-PSPP 712
Query: 600 GKRQCSR--PLRFHLSEPTHRADCRARSLT*WRARPG 704
G + + P R P+HR D R R +R PG
Sbjct: 713 GPPRNAPYGPPRGRSPPPSHRFDDRRRPDEGFRGAPG 749
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 28.3 bits (60), Expect = 6.5
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = -2
Query: 709 RGPGRARHQVRLRARQSARCVGSDRWKRSGREHWRFPG*LG-TRGCC-GRSSARNATWRS 536
RGPGR R RA G R G +R G G TRG GR+S R
Sbjct: 103 RGPGRGMVGARGRAGFRGNRGGFTSPGRGGAAGFRGRGRGGMTRGGPRGRASFGGRGARG 162
Query: 535 GSRPSCTGRSAGRGR 491
SR + G GRGR
Sbjct: 163 ASRGAARGGRGGRGR 177
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 566 SAATPPRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLMASTTWTA 709
S +P + +++TP SPAT R NA R SSP+S WT+
Sbjct: 790 SETSPQLSSTAQQTPPHSPAT----RHNA--RTSSPQSLATRHNAWTS 831
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 218 VQWESVCRTSAWRTQRRTVVVIANSYSALTLCSPRTSL 331
+QW S C +S+++ +R ++ IA ++L+L TSL
Sbjct: 74 IQWHSTCYSSSYKKDKR-LLNIATDEASLSLRQAATSL 110
>SB_36428| Best HMM Match : MutS_V (HMM E-Value=2.1e-33)
Length = 689
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 375 IVSLLVKGLVEQDHTRDVLGEHSVRAE*ELAITTTVLLC 259
+V+LLV G ++ V+G+ SV + + I TTVL C
Sbjct: 425 LVALLVFGQCDRQDETGVVGDISVVVDTRVIIDTTVLKC 463
>SB_18905| Best HMM Match : Nop (HMM E-Value=0)
Length = 194
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 YFQYPTPELQEELKKIAQAIVAPAKGILAA-----DEST-GTMGKRLQD 243
YF + ++++K A IVA AK LAA EST GT+GKRLQ+
Sbjct: 111 YFSPIVQNMPQDMRKKAARIVA-AKCTLAARVDSFHESTEGTIGKRLQE 158
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -2
Query: 712 GRG---PGRARHQVRLRARQSARCVGSDRWKRSGREHWRFPG*LGTRGCCGRSSARNATW 542
GRG P R RH + + + +R R S R R G G+R RS +R++++
Sbjct: 617 GRGFNDPTRGRHIFKPGSLRRSR----SRTSLSSRSRSRDRG--GSRRGKRRSRSRSSSY 670
Query: 541 RSGSRPSCTGRSAGRGR 491
S SR R GRGR
Sbjct: 671 SSRSRSRSRSRDRGRGR 687
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,287,388
Number of Sequences: 59808
Number of extensions: 568457
Number of successful extensions: 1686
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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