Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0404
(671 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.3
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.3
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.3
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.3
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.3
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.0
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 22 4.0
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 21 6.9
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 110 PGT-FQNP---FTLPPKCYEPQDI 51
PGT + NP T PP CY P +
Sbjct: 25 PGTDYYNPNANSTYPPACYSPPQV 48
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 63 ATGYLAF*KKNTFYDF 16
ATG F KKN +Y F
Sbjct: 168 ATGRFTFHKKNLYYSF 183
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 352 VAFLYFVGYRSRHAGAVIRDSGYD 281
+AF+ FV H V+ +SG++
Sbjct: 12 MAFIIFVSLEIYHIYTVVEESGFE 35
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/30 (20%), Positives = 16/30 (53%)
Frame = +2
Query: 344 KRNSRIASSPSSENERPYRAVCIPVSSLSI 433
+ R+ +E+ +PY V +P++ ++
Sbjct: 148 EETKRLVEDLEAESHKPYIDVVVPITQFTL 177
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,289
Number of Sequences: 336
Number of extensions: 3119
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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