Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0404
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        25   2.9  
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    23   8.8  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    23   8.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.8  

>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 315 CRDRYPTKYRNATH 356
           CR R PTK+  ATH
Sbjct: 62  CRGRCPTKFNPATH 75


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 291 LSRITAPACRDRYPTKYRN 347
           LS + A A +D+Y +KY N
Sbjct: 9   LSLVAAVAAQDKYTSKYDN 27


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 291 LSRITAPACRDRYPTKYRN 347
           LS + A A +D+Y +KY N
Sbjct: 9   LSLVAAVAAQDKYTSKYDN 27


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 180  HRFY**FVHLCCARRSLKAHCCAFYLNAVAGITVSYP 290
            HRF+  F+H+C    S +   C   + +VA +    P
Sbjct: 929  HRFFREFLHVCGFAPSPECPACTGSVESVAHVLFYCP 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,738
Number of Sequences: 2352
Number of extensions: 13878
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)