Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0401
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 117 7e-27
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 111 4e-25
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 104 7e-23
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 31 1.0
At5g26680.1 68418.m03171 endonuclease, putative similar to Swiss... 29 2.4
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 4.2
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 4.2
At5g55600.1 68418.m06932 agenet domain-containing protein / brom... 28 5.6
At5g55540.1 68418.m06919 expressed protein 28 5.6
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 7.4
At3g07610.1 68416.m00911 transcription factor jumonji (jmjC) dom... 28 7.4
At2g41990.1 68415.m05194 expressed protein 28 7.4
At2g02180.1 68415.m00154 tobamovirus multiplication protein 3 (T... 28 7.4
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 27 9.8
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 27 9.8
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 27 9.8
At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containi... 27 9.8
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 117 bits (282), Expect = 7e-27
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Frame = +2
Query: 107 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 286
++D DV +QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 287 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 466
I S LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 467 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSPDT---- 631
L +L EP+V +R R+ D LVE++L A+ +Y K K + VDT+ FL P
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSND 180
Query: 632 -----C-GGIELVAARGRIKISNTLESRLELIAQQLLPEI 733
C GG+ L + G+I NTL++RL++ + LP I
Sbjct: 181 PHGLHCSGGVVLASRDGKIVCENTLDARLDVAFRMKLPVI 220
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 111 bits (268), Expect = 4e-25
Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 13/222 (5%)
Frame = +2
Query: 107 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 286
++DADV KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 287 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 466
I S LN +R+K L+ ++D V + D A K L V D Y +LL +LI++
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120
Query: 467 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK-KDVVLKVDTENFL-------- 619
+L +L EP+V +R R+ DK +VES++ A+ Y K K + +D + FL
Sbjct: 121 SLLRLKEPSVLLRCREMDKKVVESVIEDAKRQYAEKAKVGSPKITIDEKVFLPPPPNPKL 180
Query: 620 ----SPDTCGGIELVAARGRIKISNTLESRLELIAQQLLPEI 733
P GG+ L + G+I NTL++RL++ +Q LP+I
Sbjct: 181 PDSHDPHCSGGVVLASQDGKIVCENTLDARLDVAFRQKLPQI 222
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 104 bits (249), Expect = 7e-23
Identities = 76/226 (33%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Frame = +2
Query: 107 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 286
++DAD QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 287 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELL 448
I S LN +R+KVL+ ++D V + +EA K+L +V + Y LL
Sbjct: 61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120
Query: 449 VTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSP 625
LIVQ L +L EP V +R R+ D +VES+L A +Y K K + VD + FL P
Sbjct: 121 KDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHAPEIIVDKDIFLPP 180
Query: 626 ----------DTCGGIELVAARGRIKISNTLESRLELIAQQLLPEI 733
GG+ L + G+I NTL++RLE+ + LPEI
Sbjct: 181 APSDDDPHALSCAGGVVLASRDGKIVCENTLDARLEVAFRNKLPEI 226
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 418 KGHQTVLRAAGHTYC-AGSLPAHGTHCHHPRPSNRQGSGGVPARKSPN 558
+GH+ V + +C G+ G+ C +P G+G PAR + N
Sbjct: 1613 RGHRVVYSRSSRFFCDCGAGGVRGSSCQCLKPRKYNGNGSAPARGTNN 1660
>At5g26680.1 68418.m03171 endonuclease, putative similar to
Swiss-Prot:P39748 FLAP endonuclease-1 (Maturation factor
1) (MF1) [Homo sapiens]
Length = 453
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 709 DQLQARLQSVADLDTSPGCNQLDSTTGVGRQKVLGVDFQH 590
++LQ + DL GC+ DS G+G Q L + QH
Sbjct: 215 EELQLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQH 254
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 49 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 150
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 508 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 541
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 49 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 150
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 505 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 538
>At5g55600.1 68418.m06932 agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
contains Pfam profile PF01426: BAH domain and PF05641:
Agenet domain
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 488 PTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARGR 667
P + + SLLG+ +NK KDVV+K D EN LS + + +
Sbjct: 568 PNIVEEAEPEGEKAYNSLLGE-----QNKEHKDVVVKEDDENKLSKEEDKEVGSNETKTY 622
Query: 668 IKISNTLESRLE 703
+ NT+E E
Sbjct: 623 VNHENTVEDHKE 634
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 389 RQVHYVRDL-HELSVPSDELGSACSKIGSSSEVQPASPSFHSI 264
R+ H + +L EL VP+DE A + + ++E++ PSF I
Sbjct: 1084 RRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGI 1126
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 341 LKVLKVREDHVRNVLDEARKRLAEV 415
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At3g07610.1 68416.m00911 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 1027
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 595 QHNILLDLILVVCLGFSE--QGLHQSLVGLTDADGD 494
QH L D++ V CL F E LH+ G TD D
Sbjct: 558 QHGSLKDVVAVDCLDFCEVKVNLHEFFTGYTDGRYD 593
>At2g41990.1 68415.m05194 expressed protein
Length = 297
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -1
Query: 416 ALQPGACELRQVHYVRDLHELSVPSDELGSACSKIGSSS--EVQPASPSFHS 267
AL P +R ++YV+ V GS CS +GS + SP HS
Sbjct: 16 ALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYHCSPIHHS 67
>At2g02180.1 68415.m00154 tobamovirus multiplication protein 3
(TOM3) identical to tobamovirus multiplication protein
(TOM3) GI:15425641 from [Arabidopsis thaliana]
Length = 303
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = -2
Query: 421 LWHFSQALASFVKYITYVIFTNFQYLQTSLVQHV 320
++HF + + V+ + +V N Q++Q ++QH+
Sbjct: 85 VFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHI 118
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 548 KAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 664
+++T ++NK K DV L D ++F + G +LVA G
Sbjct: 262 QSKTKHRNKKKNDVYLLPDMKSFKRCNVARGKKLVARGG 300
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 422 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 321
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 323 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 356
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 422 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 321
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 362 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 395
>At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 695
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 398 CELRQVHYVRDLHELSVPSDELG-----SACSKIGS 306
C + + Y +H+L +P+DE+ SAC+ I S
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,805,043
Number of Sequences: 28952
Number of extensions: 296707
Number of successful extensions: 838
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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