Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0399
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01920.1 68417.m00255 DC1 domain-containing protein similar t... 36 0.030
At5g48440.2 68418.m05990 FAD-dependent oxidoreductase family pro... 33 0.16
At5g48440.1 68418.m05989 FAD-dependent oxidoreductase family pro... 33 0.16
At5g34358.1 68418.m04025 hypothetical protein 32 0.37
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 31 0.48
At4g02180.1 68417.m00290 DC1 domain-containing protein contains ... 31 0.64
At2g04500.1 68415.m00455 DC1 domain-containing protein contains ... 30 1.5
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 29 2.0
At1g12170.1 68414.m01409 F-box family protein contains F-box dom... 29 2.0
At5g45730.1 68418.m05622 DC1 domain-containing protein contains ... 29 2.6
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 29 2.6
At4g01925.1 68417.m00256 DC1 domain-containing protein low simil... 29 3.4
At5g62570.1 68418.m07852 calmodulin-binding protein similar to c... 28 4.5
At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)... 28 4.5
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 28 6.0
At4g02190.1 68417.m00291 DC1 domain-containing protein contains ... 28 6.0
At4g01740.1 68417.m00226 DC1 domain-containing protein similar t... 28 6.0
At3g12570.3 68416.m01566 expressed protein 28 6.0
At3g12570.2 68416.m01565 expressed protein 28 6.0
At3g12570.1 68416.m01564 expressed protein 28 6.0
At2g43070.1 68415.m05344 protease-associated (PA) domain-contain... 28 6.0
At5g63710.1 68418.m07997 leucine-rich repeat transmembrane prote... 27 7.9
At4g01640.1 68417.m00213 hypothetical protein 27 7.9
At2g34280.1 68415.m04194 S locus F-box-related / SLF-related con... 27 7.9
>At4g01920.1 68417.m00255 DC1 domain-containing protein similar to
A. thaliana CHP-rich proteins
Length = 658
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -2
Query: 618 ARTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
AR +D+ C+ C+F +C L Q S NL +H H LL +++ NA
Sbjct: 208 ARKIDETFFFHCSPCNFTLDKVCVLRPPQQSLLNLKAHDHQLTLLPKLDSFTCNA 262
>At5g48440.2 68418.m05990 FAD-dependent oxidoreductase family
protein low similarity to hydrogen cyanide synthase HcnC
from Pseudomonas fluorescens [GI:3220203]; contains Pfam
profile PF01266 FAD dependent oxidoreductase
Length = 333
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 252 GWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVLGGLWI 431
GWK+ GSLL+ RT + ++ + + + ++ + P + V D G ++
Sbjct: 40 GWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFL 99
Query: 432 PGDGVGDPH 458
P D D H
Sbjct: 100 PDDSQLDAH 108
>At5g48440.1 68418.m05989 FAD-dependent oxidoreductase family
protein low similarity to hydrogen cyanide synthase HcnC
from Pseudomonas fluorescens [GI:3220203]; contains Pfam
profile PF01266 FAD dependent oxidoreductase
Length = 367
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 252 GWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVLGGLWI 431
GWK+ GSLL+ RT + ++ + + + ++ + P + V D G ++
Sbjct: 40 GWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFL 99
Query: 432 PGDGVGDPH 458
P D D H
Sbjct: 100 PDDSQLDAH 108
>At5g34358.1 68418.m04025 hypothetical protein
Length = 116
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 490 VASLIRDIQSKCGSPTPSPGIHRPPSTSST 401
+A+ I+D QSK P+P P + R STSST
Sbjct: 1 MAAQIKDFQSKPRPPSPIPKVRRSGSTSST 30
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -2
Query: 618 ARTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
AR +D C+ C+F C L Q S NL +H H LL +++ NA
Sbjct: 205 ARKIDDRYFYHCSSCNFTLDMRCVLHPPQQSLLNLKAHDHQLTLLPRLDSFTCNA 259
>At4g02180.1 68417.m00290 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 989
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2
Query: 618 ARTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
AR +D + C+ C+F C L+ Q S NL +H H LL ++ NA
Sbjct: 237 ARKIDDRLFYHCSPCNFTLDLRCVLNPPQQSLLNLKAHDHQLTLLPRLLSFTCNA 291
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 618 ARTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
AR +D + C+ C+F C L+ S NL +H H LL ++ NA
Sbjct: 541 ARNIDDRLFYHCSPCNFTLDLRCVLNPPPQSLLNLKAHDHQLILLPRLRSFTCNA 595
>At2g04500.1 68415.m00455 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 495
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 585 CTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
CTIC+ + C +++ L+ H H + LLL T+ NA
Sbjct: 40 CTICNVNMDLDCMVNLPPLTIFEPKHHKHSFNLLLRVVTFTCNA 83
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 585 CTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
CTIC+ + C ++ L+ + H H LLL T+ NA
Sbjct: 114 CTICNLNVDIECLFALPPLTISEPKHHKHSLSLLLRLVTFTCNA 157
>At1g12170.1 68414.m01409 F-box family protein contains F-box domain
Pfam:PF00646
Length = 364
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 506 CDGRLFCDSCAIERRQSVWE-WKLQ 577
CDG LFCDS + ++ ++W W Q
Sbjct: 98 CDGLLFCDSWSWRKKAAIWNPWLRQ 122
>At5g45730.1 68418.m05622 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 519
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 585 CTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
C+IC+F C L+ A L+ SH H L+ + + NA
Sbjct: 104 CSICNFSVDLRCWLNPAPLTIYEQKSHSHTLTLMARKDAFTCNA 147
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 585 CTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
C+ C+F C L+ Q S NL +H H LL +++ NA
Sbjct: 215 CSSCNFTLDMRCVLNPPQQSLLNLKAHDHQLTLLPRLDSFTCNA 258
>At4g01925.1 68417.m00256 DC1 domain-containing protein low
similarity to UV-B light insensitive ULI3 [Arabidopsis
thaliana] GI:17225050; contains Pfam profile PF03107:
DC1 domain
Length = 399
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 609 VDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
+D + C+ C+F C L Q S NL +H H LL +++ NA
Sbjct: 140 IDDRLFYHCSSCNFTLGLCCVLRPPQPSLLNLKAHDHQLTLLPRLDSFTCNA 191
>At5g62570.1 68418.m07852 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 487
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 265 HCFHPVGLPRASSSLRSLIEDWASLT*ASVGLNAPTR 155
+C H +GL S L+S ++D+ S ASVG A ++
Sbjct: 428 NCSHILGLEEPQSELQSALDDFMSQKNASVGGKAHSK 464
>At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)
identical to PIR|T05180|T05180 S-receptor kinase ARK3
precursor - [Arabidopsis thaliana]
Length = 850
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Frame = +3
Query: 435 GDGVGDPHLLCMSLMREAT---DKGVGVME-------DCSVTAVLSKDDKVSGSGNYKW 581
G G G L M L T D+G+GV E DC+ TA + D + SGSG W
Sbjct: 348 GGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTW 406
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 219 LKELEARGRPTGWKQCGSLLLARTRDR 299
L++L+A + TGW GS ++ T+DR
Sbjct: 322 LEQLDAMAKETGWFGYGSRIIITTQDR 348
>At4g02190.1 68417.m00291 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 659
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -2
Query: 615 RTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
+ +D + C+ C+F C L+ +S + +H H LL +++ NA
Sbjct: 210 KKIDSPLFYHCSPCNFTLDMRCALNPPSISFEDSKTHDHQLTLLPRLDSFTCNA 263
>At4g01740.1 68417.m00226 DC1 domain-containing protein similar to
T15B16.6 similar to A. thaliana CHP-rich hypothetical
proteins encoded by T10M13, GenBank accession number
AF001308
Length = 652
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 618 ARTVDKVITLDCTICSFHSQTLCRLSIAQLSQNNLPSHPHLYQLLLS*ETYRANA 454
A+ ++ + C++C+F C L+ Q NL +H H LL S ++ +A
Sbjct: 178 AKEIEVGLFYHCSLCNFTLDMSCVLNPPQRYLWNLKAHDHQLTLLPSLRSFLCSA 232
>At3g12570.3 68416.m01566 expressed protein
Length = 489
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +2
Query: 248 HRVETMWFTIIGKNKRPHDCL--------QKNEKSVCIVEHRL*LSYTKEMS*IISN 394
H V+T+ + G NKR DCL +EKS+ + H L ++ + S ++ N
Sbjct: 300 HAVDTVEVQLAGSNKRKRDCLALGNCDDSSSSEKSLDMKIHATELPWSNDFSGVMKN 356
>At3g12570.2 68416.m01565 expressed protein
Length = 489
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +2
Query: 248 HRVETMWFTIIGKNKRPHDCL--------QKNEKSVCIVEHRL*LSYTKEMS*IISN 394
H V+T+ + G NKR DCL +EKS+ + H L ++ + S ++ N
Sbjct: 300 HAVDTVEVQLAGSNKRKRDCLALGNCDDSSSSEKSLDMKIHATELPWSNDFSGVMKN 356
>At3g12570.1 68416.m01564 expressed protein
Length = 489
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +2
Query: 248 HRVETMWFTIIGKNKRPHDCL--------QKNEKSVCIVEHRL*LSYTKEMS*IISN 394
H V+T+ + G NKR DCL +EKS+ + H L ++ + S ++ N
Sbjct: 300 HAVDTVEVQLAGSNKRKRDCLALGNCDDSSSSEKSLDMKIHATELPWSNDFSGVMKN 356
>At2g43070.1 68415.m05344 protease-associated (PA) domain-containing
protein contains protease associated (PA) domain,
Pfam:PF02225
Length = 540
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 88 F*FSLIFLYCEEWVQGVAGIHQALLEHSSQHLLR*GLPSPQLGFLRSLRLVV 243
F + L +C +QG+ I A++ +HL R + P LG + L L+V
Sbjct: 278 FVWVLTIFFCIGGMQGMHNIIMAVILRKCRHLARKSVKLPLLGTMSVLSLLV 329
>At5g63710.1 68418.m07997 leucine-rich repeat transmembrane protein
kinase, putative
Length = 614
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 146 FIRPCWSIQANTCSGEACPVLN*AS*GA*GS 238
F+ PC+S TC G++ LN AS G G+
Sbjct: 77 FVSPCYSWSYVTCRGQSVVALNLASSGFTGT 107
>At4g01640.1 68417.m00213 hypothetical protein
Length = 300
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 273 LLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVLGG 422
L++ DR+ V +M V WS+D D T K+ + + LN+ L G
Sbjct: 190 LIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSI--DLNITSSLFG 237
>At2g34280.1 68415.m04194 S locus F-box-related / SLF-related
contains Pfam PF00646: F-box domain; contains weak hit
to TIGRFAM TIGR01640 : F-box protein interaction domain;
weakly similar to self-incompatibility (S-) locus F-box
(GI:29420811) [Prunus mume]
Length = 391
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 273 LLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVLGG 422
L++ DR+ V +M V WS+D D T K+ + + LN+ L G
Sbjct: 281 LIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSI--DLNITSSLFG 328
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,398,832
Number of Sequences: 28952
Number of extensions: 307379
Number of successful extensions: 947
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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