Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0398
(416 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0488 - 4070506-4072277,4072455-4072557 33 0.12
07_01_0618 + 4577417-4577430,4577838-4577874,4578070-4578173,457... 30 0.65
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 30 0.65
04_01_0127 + 1368763-1369276,1385539-1385742,1386221-1386444,138... 29 1.1
03_01_0069 + 549787-549791,550033-550303,550405-552201 29 1.1
12_02_0995 + 25104303-25104486,25105164-25105275,25106466-251065... 29 2.0
02_02_0617 - 12184745-12185008,12185352-12185451,12186585-121866... 29 2.0
02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070 29 2.0
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 28 2.6
01_01_0473 - 3478660-3480338,3480507-3480609 28 2.6
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 28 3.5
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 28 3.5
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 28 3.5
01_01_0531 - 3892738-3892757,3893083-3893111,3893330-3893355,389... 28 3.5
01_01_0530 - 3877337-3877396,3877709-3877837,3877954-3878221,387... 28 3.5
05_04_0400 + 20977173-20977481,20978258-20978577,20978724-209788... 27 4.6
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 27 4.6
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 27 6.0
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 27 6.0
12_02_1173 + 26692030-26692379,26692478-26692565,26693309-266934... 27 8.0
09_06_0326 + 22352705-22352764,22352878-22353011,22353160-223532... 27 8.0
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEI 337
S E S S E +LSE S ++ L S AEL+Q+ D A++ + ++ L ++LA +
Sbjct: 441 SLEKSSLSAELSKLSEANASLEAKLASVEAELKQVYDEKANESLNSEKEISRLNQELANV 500
>07_01_0618 +
4577417-4577430,4577838-4577874,4578070-4578173,
4578512-4578707,4579559-4579628,4579849-4579952,
4580296-4580335,4581016-4581070,4581418-4581426,
4582026-4582157,4582544-4582613,4583029-4583086,
4583173-4583228,4583315-4583470,4583589-4583700,
4583782-4583923,4584141-4584216,4584306-4584401,
4584509-4584637
Length = 551
Score = 30.3 bits (65), Expect = 0.65
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 254 QQLRDLSAHQRKRIAELLTNLLRDLAEIGAA 346
++LRDLS ++ ++E++T+L DLA++ A
Sbjct: 262 EELRDLSLQVKRCLSEIITSLCADLAQLEGA 292
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 30.3 bits (65), Expect = 0.65
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRI 295
++E++S EC+++ + ++ SAL +AE ++ ++ H+ K I
Sbjct: 439 AKELESSKYECEKVRKAMEDMASALQEMSAEARESQENYLHKEKEI 484
>04_01_0127 +
1368763-1369276,1385539-1385742,1386221-1386444,
1386520-1386707,1394955-1394970
Length = 381
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +1
Query: 28 QGAIMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVNYDQQVAGGRQQESR 186
+G ++++YK + + + ++KEE K+ QAL++ A D+ G QE++
Sbjct: 70 KGTLVQKYKIKVVAEDTKTSSSKEEEKK--QALDDSAQPSDKDATDGSAQENQ 120
>03_01_0069 + 549787-549791,550033-550303,550405-552201
Length = 690
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEI 337
+++V+ + + + + +++ + + +A EL+Q R HQR+ E + + LAEI
Sbjct: 572 AKQVEQRRQALEAATMEVEEAEFSKLAAERELRQWRAEHEHQRRLTGEGMASPRTGLAEI 631
Query: 338 GAAVGG 355
GG
Sbjct: 632 SVFDGG 637
>12_02_0995 +
25104303-25104486,25105164-25105275,25106466-25106554,
25106635-25106703,25106784-25106913,25107073-25107231,
25107364-25107736,25108070-25108182,25108429-25108624,
25108855-25109288,25109360-25109495,25109668-25111086
Length = 1137
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 167 VDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
++S S D++ +DL S+ +TS +++ D+S R +ELL N L D
Sbjct: 500 IESSSPPDDRILDDLSSQAEEITSNADNPEEVSDIS-DNRDDSSELLHNDLED 551
>02_02_0617 -
12184745-12185008,12185352-12185451,12186585-12186653,
12187988-12188037
Length = 160
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 140 LITTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKR 292
L+ TS+ Q ++ R C + EDL+S L +QL++ S H R R
Sbjct: 24 LVVTSEDQSPLTEDRHCHLMGEDLESLN--LKELQQLEKQLKNTSKHIRSR 72
>02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070
Length = 553
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 188 CDQLSEDLQSKQSALTSATAEL-QQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSEL 364
C ++ Q +L +TAEL ++LR SA Q AEL+ LL + + A+ SE
Sbjct: 302 CPTVASMAQELGESLPLSTAELVKKLR--SASQWPAEAELVQELLTSSSVLDKAMDWSES 359
Query: 365 DFKLNV 382
+ KLN+
Sbjct: 360 EVKLNL 365
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLA 331
S ++E+D K + + E+++S QSAL T + +L + ++ ++ +L + L++
Sbjct: 330 SCNKEIDKKKDDSKKHLEEMKSLQSALVDVTRAIDELNEQGQNKSDKL-QLADDQLQEYH 388
Query: 332 EIGAAVG 352
+ +G
Sbjct: 389 RMKLVLG 395
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR----DLSAHQRKRIAEL 304
SQE S E +L E S + LTS ++LQQL + S K+I++L
Sbjct: 409 SQEKSSLGAEIQKLKEANASLEGKLTSTESQLQQLHAEKSEASISSEKQISDL 461
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 34 AIMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVNYDQQVAGGRQQESR 186
A++ KE + +N + EAAKEE+ LE + + A Q E +
Sbjct: 58 ALLEAMKEELVAANNELEAAKEEISRKNNELESVKKQLQESEARNIQAEQQ 108
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 188 CDQLS-EDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGG 355
C +L DL A+ AT + ++ + AHQ ++ L L+ DL E +GG
Sbjct: 1810 CGELKFVDLLDTIIAMAKATFDSLIMKSMLAHQNNNLSHLNGTLVADLVESTPDMGG 1866
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 200 SEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSELDFKLN 379
S D + A S +++ L +S+ +R+R+ + L DL G E+D+KL
Sbjct: 440 SIDALQQSLAKYSKASQVSGLVLVSSRERERVLRIFEGLDTDLTSYEGTRGMQEIDYKLL 499
Query: 380 VD 385
D
Sbjct: 500 KD 501
>01_01_0531 -
3892738-3892757,3893083-3893111,3893330-3893355,
3893639-3893767,3893884-3894151,3894355-3894694,
3894925-3895045,3895135-3895230,3895604-3895777,
3895902-3896068,3896675-3896840,3896915-3897053,
3897135-3897327,3897442-3897524,3897850-3897881
Length = 660
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 164 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAE-LLTNLLRDLAEIG 340
+ DS +E L + + + + E ++ + AH R+ E L+NLL+ L +G
Sbjct: 409 QTDSVDKELKSLKDAILQEVDKEGTLAEEFDPIKHIEAHLPVRVNEQRLSNLLQSLL-VG 467
Query: 341 AAVG 352
A VG
Sbjct: 468 ACVG 471
>01_01_0530 -
3877337-3877396,3877709-3877837,3877954-3878221,
3878385-3878776,3879003-3879119,3879209-3879304,
3879775-3879948,3880077-3880243,3880800-3880965,
3881040-3881178,3881767-3881901,3882157-3882161
Length = 615
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 164 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAE-LLTNLLRDLAEIG 340
+ DS +E L + + + + E ++ + AH R+ E L+NLL+ L +G
Sbjct: 356 QTDSVDKELKSLKDAMLQEGDKEGTLAEEFDPIKHIEAHLPVRVNEQRLSNLLQSLL-VG 414
Query: 341 AAVG 352
A VG
Sbjct: 415 ACVG 418
>05_04_0400 +
20977173-20977481,20978258-20978577,20978724-20978850,
20979827-20979914,20980328-20980425,20980607-20980676,
20980787-20980887,20981207-20981323,20981417-20981493,
20981716-20982229
Length = 606
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 265
SKSQE D+KSR Q+ + QS + + ++ LR
Sbjct: 539 SKSQEFDTKSRHSKQIRLIKSNSQSPTSGSRKDMLSLR 576
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 248 ELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAA 346
EL ++ L +++ IAE LTN R E GAA
Sbjct: 427 ELVNIKKLKEQKKEEIAESLTNCQRLAVECGAA 459
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 146 TTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAEL 253
+++KS E+D+ + E D LS+D+ Q +++ +++
Sbjct: 1385 SSTKSIELDADNNEMDTLSDDISKLQDSISLLESQI 1420
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 158 SQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 265
S++++ EC +L +D K + + AE+Q LR
Sbjct: 170 SKQMNDVKNECSELKKDRTRKDLEIKAKEAEIQSLR 205
>12_02_1173 +
26692030-26692379,26692478-26692565,26693309-26693436,
26693514-26693705,26693810-26694012,26694127-26694290,
26694419-26694499,26694592-26694758,26694839-26694944,
26695097-26695347,26695388-26695508,26695594-26695722,
26695813-26696181
Length = 782
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 37 IMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVN 144
+ R YK I ++ A KEE+ +V++ EEL ++
Sbjct: 450 VRREYKAKKISEDEYVSAIKEEISKVVKIQEELDID 485
>09_06_0326 +
22352705-22352764,22352878-22353011,22353160-22353228,
22353978-22354049,22354622-22354694,22354813-22354862,
22355063-22355135,22355152-22355193
Length = 190
Score = 26.6 bits (56), Expect = 8.0
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 333 SARSRSKFVNNSAMRFR*-CADKSRSCCSSAVALVR 229
SA ++ V + M+FR C DKSR C A+A+VR
Sbjct: 86 SASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVR 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,421,077
Number of Sequences: 37544
Number of extensions: 125278
Number of successful extensions: 540
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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