Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0398
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 0.44
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 0.44
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 30 0.78
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 30 0.78
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 0.78
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 30 0.78
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 1.4
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 1.4
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 1.4
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 2.4
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 28 2.4
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 27 5.5
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 5.5
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 5.5
AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical ... 27 5.5
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 7.2
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 7.2
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 7.2
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 27 7.2
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 7.2
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 7.2
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 7.2
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 7.2
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 27 7.2
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 27 7.2
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 26 9.5
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 26 9.5
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 26 9.5
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 26 9.5
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 26 9.5
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 26 9.5
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 26 9.5
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.7 bits (66), Expect = 0.44
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +2
Query: 146 TTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
T S E+D+ R+ QLS DL + +A EL + D + + K +A+ + +L
Sbjct: 1473 TDDLSSELDAAQRDNRQLSTDLFKAK----TANDELAEYLDSTRRENKSLAQEVKDLTDQ 1528
Query: 326 LAEIGAAVGGSELDFKLNVDTVRKLEEE 409
L E G +V +EL VRKLE E
Sbjct: 1529 LGEGGRSV--AELQ-----KIVRKLEVE 1549
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.7 bits (66), Expect = 0.44
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +2
Query: 146 TTSKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
T S E+D+ R+ QLS DL + +A EL + D + + K +A+ + +L
Sbjct: 1473 TDDLSSELDAAQRDNRQLSTDLFKAK----TANDELAEYLDSTRRENKSLAQEVKDLTDQ 1528
Query: 326 LAEIGAAVGGSELDFKLNVDTVRKLEEE 409
L E G +V +EL VRKLE E
Sbjct: 1529 LGEGGRSV--AELQ-----KIVRKLEVE 1549
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 76 KQNEAAKEEVKEVLQALEELAVNYDQQVA 162
K+ E ++E KE++ ALEE+AVN D + A
Sbjct: 489 KEAEDKQQEGKEMMTALEEIAVNLDVRQA 517
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 76 KQNEAAKEEVKEVLQALEELAVNYDQQVA 162
K+ E ++E KE++ ALEE+AVN D + A
Sbjct: 489 KEAEDKQQEGKEMMTALEEIAVNLDVRQA 517
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 3380 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 3438
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 3439 KQLGSAVG 3446
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 4283 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 4341
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 4342 KQLGSAVG 4349
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 5237 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 5295
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 5296 KQLGSAVG 5303
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 6140 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 6198
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 6199 KQLGSAVG 6206
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 7043 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 7101
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 7102 KQLGSAVG 7109
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 SKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-L 328
S QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L
Sbjct: 7946 SVPQEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLL 8004
Query: 329 AEIGAAVG 352
++G+AVG
Sbjct: 8005 KQLGSAVG 8012
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 76 KQNEAAKEEVKEVLQALEELAVNYDQQVA 162
K+ E ++E KE++ ALEE+AVN D + A
Sbjct: 489 KEAEDKQQEGKEMMTALEEIAVNLDVRQA 517
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 146 TTSKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAHQRK 289
T K + + + K +ECD+L E L + +AL A E + +L DL +QR+
Sbjct: 847 TIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQ 899
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 146 TTSKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAHQRK 289
T K + + + K +ECD+L E L + +AL A E + +L DL +QR+
Sbjct: 847 TIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQ 899
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 146 TTSKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAHQRK 289
T K + + + K +ECD+L E L + +AL A E + +L DL +QR+
Sbjct: 847 TIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQ 899
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 146 TTSKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAHQRK 289
T K + + + K +ECD+L E L + +AL A E + +L DL +QR+
Sbjct: 847 TIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQ 899
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +2
Query: 167 VDSKSRECDQLSEDLQSKQSALTSATAELQQLRD 268
++ +S+ C++L +D+++ SAL + + +QLRD
Sbjct: 42 LNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRD 75
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 266 DLSAHQRKRIAELLTNLLRDLAEIG----AAVGGSELDFKLNVDTVRKLEEEF 412
+ A+ RKR+ EL+ + D ++ AVG E+ K+ D + K+E+ F
Sbjct: 349 EYQAYDRKRLMELIKMSITDNGQVSNELKIAVGAMEIADKVVKDVMTKIEDVF 401
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 1 GNKQN*LPAQGAIMRRYKET*IESNKQNEAAKEEVKEVLQALEELAVNYDQQVA 162
GNK AQ R T ++ +Q EAAK++ K+ L + L +Q+VA
Sbjct: 33 GNKNQKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVA 86
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 173 SKSRE-CDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
SK R+ C+QL EDL+ K L E Q++ Q+K E + RD
Sbjct: 529 SKFRDKCEQLKEDLRKKSGELAQEKNETQRV----FQQKKDADEAFAEIKRD 576
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 173 SKSRE-CDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 325
SK R+ C+QL EDL+ K L E Q++ Q+K E + RD
Sbjct: 529 SKFRDKCEQLKEDLRKKSGELAQEKNETQRV----FQQKKDADEAFAEIKRD 576
>AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical
protein Y18D10A.11 protein.
Length = 248
Score = 27.1 bits (57), Expect = 5.5
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +2
Query: 164 EVDSKSRECDQLSEDLQSK-QSALTSATAELQQLRDLSAHQRKRIAELLTNLLR------ 322
+++S+ Q ++ Q + + L S+ A+ +QL + + +K ELL LLR
Sbjct: 58 QLESRLEVVQQAAKAQQKRWEGELASSRAQNEQLSEEKSQLQKENEELLLVLLRTEGIVD 117
Query: 323 ---DLAEIGAAVGGSELDFKLNVDTVRKLEEE 409
L+E A +E+ +TV KLEEE
Sbjct: 118 ANKSLSEQLANAQDAEVSMTTLKETVAKLEEE 149
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 191 DQLSEDLQSKQSALTSATAELQQLRD--LSAHQRKRIAELLTN-LLRDLAEI 337
D+L ++ Q + +A T+ A QLR+ S ++ R AE LTN L+R +E+
Sbjct: 1051 DELEKEKQQRHNAETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL 1102
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 191 DQLSEDLQSKQSALTSATAELQQLRD--LSAHQRKRIAELLTN-LLRDLAEI 337
D+L ++ Q + +A T+ A QLR+ S ++ R AE LTN L+R +E+
Sbjct: 1051 DELEKEKQQRHNAETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL 1102
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 26.6 bits (56), Expect = 7.2
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +2
Query: 155 KSQEVDSKSREC-DQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLA 331
+S E+ +++ E DQL+ED + K +A S Q+ +L A + + + T R L
Sbjct: 262 QSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDAQRTDQETRITTFESRFLT 321
Query: 332 EIGAAVGGSELDFKL-----NVDTVRKLEEE 409
+ +L+ KL N D +L EE
Sbjct: 322 AQRESTCIRDLNDKLEHQLANKDAAVRLNEE 352
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 191 DQLSEDLQSKQSALTSATAELQQLRD--LSAHQRKRIAELLTN-LLRDLAEI 337
D+L ++ Q + +A T+ A QLR+ S ++ R AE LTN L+R +E+
Sbjct: 1051 DELEKEKQQRHNAETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL 1102
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 227 ALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 328
ALT AT E+ LRD A Q + E L LR L
Sbjct: 429 ALTIATKEMGDLRDKEAQQMEDYIESLICTLRHL 462
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +2
Query: 155 KSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 334
K+ +D E D+L + L++++ E+ + R + +AE L ++LAE
Sbjct: 520 KTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAELRKELAE 575
Query: 335 IGAAVGGSELDFKLNVDTVRKLEEE 409
A + E + KLN + + + E
Sbjct: 576 FQAIITAMEGEGKLNQEQFLESKNE 600
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +2
Query: 155 KSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 334
K+ +D E D+L + L++++ E+ + R + +AE L ++LAE
Sbjct: 520 KTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAELRKELAE 575
Query: 335 IGAAVGGSELDFKLNVDTVRKLEEE 409
A + E + KLN + + + E
Sbjct: 576 FQAIITAMEGEGKLNQEQFLESKNE 600
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +2
Query: 155 KSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 334
K+ +D E D+L + L++++ E+ + R + +AE L ++LAE
Sbjct: 280 KTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAELRKELAE 335
Query: 335 IGAAVGGSELDFKLNVDTVRKLEEE 409
A + E + KLN + + + E
Sbjct: 336 FQAIITAMEGEGKLNQEQFLESKNE 360
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +2
Query: 155 KSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 334
K+ +D E D+L + L++++ E+ + R + +AE L ++LAE
Sbjct: 520 KTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAELRKELAE 575
Query: 335 IGAAVGGSELDFKLNVDTVRKLEEE 409
A + E + KLN + + + E
Sbjct: 576 FQAIITAMEGEGKLNQEQFLESKNE 600
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 26.6 bits (56), Expect = 7.2
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +2
Query: 155 KSQEVDSKSREC-DQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLA 331
+S E+ +++ E DQL+ED + K +A S Q+ +L A + + + T R L
Sbjct: 262 QSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDAQRTDQETRITTFESRFLT 321
Query: 332 EIGAAVGGSELDFKL-----NVDTVRKLEEE 409
+ +L+ KL N D +L EE
Sbjct: 322 AQRESTCIRDLNDKLEHQLANKDAAVRLNEE 352
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 227 ALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 328
ALT AT E+ LRD A Q + E L LR L
Sbjct: 429 ALTIATKEMGDLRDKEAQQMEDYIESLICTLRHL 462
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 67 ESNKQNEAAKEEVKEVLQALEELAVNYDQQ 156
E ++NE K EVK++ Q +EE+ Y ++
Sbjct: 123 ELMEENEQLKAEVKDLQQEIEEMQDQYREE 152
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 67 ESNKQNEAAKEEVKEVLQALEELAVNYDQQ 156
E ++NE K EVK++ Q +EE+ Y ++
Sbjct: 123 ELMEENEQLKAEVKDLQQEIEEMQDQYREE 152
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 67 ESNKQNEAAKEEVKEVLQALEELAVNYDQQ 156
E ++NE K EVK++ Q +EE+ Y ++
Sbjct: 123 ELMEENEQLKAEVKDLQQEIEEMQDQYREE 152
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 185 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 307
E L+E +Q +Q+ + A LQ DLS +RKR+ E L
Sbjct: 1651 EKSPLTEQIQVRQAQIEKLYAGLQ---DLSKERRKRLEETL 1688
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 185 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 307
E L+E +Q +Q+ + A LQ DLS +RKR+ E L
Sbjct: 1651 EKSPLTEQIQVRQAQIEKLYAGLQ---DLSKERRKRLEETL 1688
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical protein
T04G9.1 protein.
Length = 1610
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 272 SAHQRKRIAELLTNLLRDLAEIGAAVGGSE-LDFKLNVDTVRKLEEE 409
S H +L+ ++ RD+ G+ V G + LD+K D ++L+ E
Sbjct: 1377 STHFNSNDQKLVNSIQRDVKMYGSVVSGDQLLDYKPGRDDEKQLDVE 1423
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 185 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 307
E L+E +Q +Q+ + A LQ DLS +RKR+ E L
Sbjct: 1651 EKSPLTEQIQVRQAQIEKLYAGLQ---DLSKERRKRLEETL 1688
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 185 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 307
E L+E +Q +Q+ + A LQ DLS +RKR+ E L
Sbjct: 1651 EKSPLTEQIQVRQAQIEKLYAGLQ---DLSKERRKRLEETL 1688
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 185 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 307
E L+E +Q +Q+ + A LQ DLS +RKR+ E L
Sbjct: 1651 EKSPLTEQIQVRQAQIEKLYAGLQ---DLSKERRKRLEETL 1688
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,007,236
Number of Sequences: 27780
Number of extensions: 101655
Number of successful extensions: 515
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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